RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-203ENST00000449049 NXF2Q9GZY0 626 aaKnown RBP11.9□□□□□ -0.5
SHMT2-203ENST00000449049 MRPS28Q9Y2Q9 187 aaKnown RBP11.9□□□□□ -0.5
SHMT2-203ENST00000449049 H7C417 338 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 J3QRK9 145 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 POU3F4P49335 361 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 CLDN12P56749 244 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 ARPC4P59998 168 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 MPPED2Q15777 294 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 AWAT2Q6E213 333 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 AQP3Q92482 292 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 AP3S1Q92572 193 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 CACNG6Q9BXT2 260 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 LIN7BQ9HAP6 207 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 ABRACLQ9P1F3 81 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 GHRLQ9UBU3 117 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 COL12A1Q99715 3063 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-203ENST00000449049 PLATP00750 562 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 SCAND1P57086 179 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 CCL8P80075 99 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 P2RY14Q15391 338 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 SLC25A26Q70HW3 274 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 C1QL2Q7Z5L3 287 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 ACOT12Q8WYK0 555 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 ERGIC1Q969X5 290 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 EGLN1Q9GZT9 426 aa11.89□□□□□ -0.51
SHMT2-203ENST00000449049 A0A0B4J203 849 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 IGKV1-12A0A0C4DH73 117 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 IGHV3-64DA0A0J9YX35 117 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 CDIPTO14735 213 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 SYNGR1O43759 233 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 ANGPTL7O43827 346 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 CLPXO76031 633 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 BPNT1O95861 308 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 IGKV1D-12P01611 117 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 UBBP0CG47 229 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 CALCBP10092 127 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 EIF2B2P49770 351 aaKnown RBP11.88□□□□□ -0.51
SHMT2-203ENST00000449049 CAPZA1P52907 286 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 MKXQ8IYA7 352 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 OR51D1Q8NGF3 324 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 FAM3DQ96BQ1 224 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 VRK1Q99986 396 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-203ENST00000449049 FN3KRPQ9HA64 309 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 GCM1Q9NP62 436 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 DECR2Q9NUI1 292 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 IL36GQ9NZH8 169 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
SHMT2-203ENST00000449049 PLCE1Q9P212 2302 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 A0A075B6Q4 140 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 OVOL3O00110 214 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 LDLRAD4O15165 306 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 RHBDL1O75783 438 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ACAA1P09110 424 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ARSBP15848 533 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 QRFPP83859 136 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 OXA1LQ15070 435 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 WDR82Q6UXN9 313 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 OR51F2Q8NH61 342 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 Q8TCH9 128 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 SMURF1Q9HCE7 757 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 UFSP2Q9NUQ7 469 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 MTCH1Q9NZJ7 389 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 A6NLC8 198 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 KDM4BO94953 1096 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 PAHP00439 452 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 SNRPBP14678 240 aaKnown RBP11.87□□□□□ -0.51
SHMT2-203ENST00000449049 CFHR2P36980 270 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 PMELP40967 661 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 C2orf76Q3KRA6 126 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 MOGAT3Q86VF5 341 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 MCFD2Q8NI22 146 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 LGALS14Q8TCE9 139 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 SLAMF9Q96A28 289 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 S100A13Q99584 98 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 METTL9Q9H1A3 318 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 C1orf123Q9NWV4 160 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 FBLN5Q9UBX5 448 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 SPATA2Q9UM82 520 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ING4Q9UNL4 249 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
SHMT2-203ENST00000449049 HRNRQ86YZ3 2850 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-203ENST00000449049 NOS1APO75052 506 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-203ENST00000449049 ZNF780AO75290 641 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-203ENST00000449049 CYB5AP00167 134 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms