RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NDUFB11Q9NX14 153 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 DCAF16Q9NXF7 216 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF69Q9UC07 566 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 PIGLQ9Y2B2 252 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 RHBDD3Q9Y3P4 386 aa11.5□□□□□ -0.57
PDLIM2-213ENST00000448520 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 F5H0A9 414 aaPredicted RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 H0YL77 283 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM178BH3BS89 294 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 PIN1P1O15428 100 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 GPX5O75715 221 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 HLA-DPB1P04440 258 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 CD1AP06126 327 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 CD36P16671 472 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 PAX8Q06710 450 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 HNRNPA0Q13151 305 aaKnown RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 GPR50Q13585 617 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 ZMYND11Q15326 602 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 YIF1BQ5BJH7 314 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 Q6ZSR3 168 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 SATL1Q86VE3 508 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 OR13F1Q8NGS4 319 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 OR13G1Q8NGZ3 307 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 GPR148Q8TDV2 347 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 ITLN1Q8WWA0 313 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 RPL3LQ92901 407 aaKnown RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 SLC25A28Q96A46 364 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 NAA50Q9GZZ1 169 aaKnown RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 OR5V1Q9UGF6 321 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 DHDHQ9UQ10 334 aa11.49□□□□□ -0.57
PDLIM2-213ENST00000448520 CLDN34H7C241 214 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 GABRPO00591 440 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 FSTL3O95633 263 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 WNT2P09544 360 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 OCM2P0CE71 109 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 CA6P23280 308 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 CFL1P23528 166 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 GABRA5P31644 462 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 RBMXP38159 391 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 MAP2K3P46734 347 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 IL13RA1P78552 427 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 BAMBIQ13145 260 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 ACSM3Q53FZ2 586 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 PIGCQ92535 297 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 DERL3Q96Q80 235 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 OR2V2Q96R30 315 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 NKX3-1Q99801 234 aaPredicted RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 PAPOLGQ9BWT3 736 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 FGF23Q9GZV9 251 aaPredicted RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 OPA3Q9H6K4 179 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 RNF167Q9H6Y7 350 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 EXOSC4Q9NPD3 245 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 GPR173Q9NS66 373 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
PDLIM2-213ENST00000448520 TRAV8-7A0A075B6U6 113 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 TRBV5-7A0A0A0MS05 114 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 IGHV3-64DA0A0J9YX35 117 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF850A8MQ14 1090 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF879B4DU55 563 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 MLNRO43193 412 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 MTRF1O75570 445 aaKnown RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF20P17024 532 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 TGFBR1P36897 503 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 RPL5P46777 297 aaKnown RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 SRP9P49458 86 aaKnown RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 PRDX4Q13162 271 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 Q499Y3 187 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 CEP78Q5JTW2 689 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 UNQ9370/PRO34162Q6UXP9 181 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 GPR141Q7Z602 305 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 CEACAM19Q7Z692 300 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 OR8G5Q8NG78 346 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 OR10AD1Q8NGE0 317 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 NPRL2Q8WTW4 380 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM106AQ96A25 262 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 CHCHD6Q9BRQ6 235 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 SSBP3Q9BWW4 388 aaPredicted RBP11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 PLEKHA1Q9HB21 404 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 NOX4Q9NPH5 578 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF391Q9UJN7 358 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 TRRAPQ9Y4A5 3859 aa11.47□□□□□ -0.57
PDLIM2-213ENST00000448520 LOC100506127A0A0U1RQW1 187 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 ZNF816-ZNF321PA0A0X1KG74 233 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 ANKRD30BLA7E2S9 258 aa11.46□□□□□ -0.57
PDLIM2-213ENST00000448520 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms