RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 PIPOXQ9P0Z9 390 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 HS3ST2Q9Y278 367 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 H3BP45 60 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 CRYBB2P43320 205 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GNG4P50150 75 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SIRT6Q8N6T7 355 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 VN1R2Q8NFZ6 395 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 ORAI1Q96D31 301 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 DERL1Q9BUN8 251 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 A4GALTQ9NPC4 353 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 PARP11Q9NR21 331 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 TRAV36DV7A0A075B6V5 113 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 NPBWR2P48146 333 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 CAMPP49913 170 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PPP1R1AQ13522 171 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 ZNF628Q5EBL2 1059 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 OR10J5Q8NHC4 309 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMC6-207ENST00000448223 CLDN16Q9Y5I7 305 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 HOXB3P14651 431 aaPredicted RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 GLRA1P23415 457 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 TMEM33P57088 247 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 CSNK1G2P78368 415 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 POU3F1Q03052 451 aaPredicted RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 NKAIN4Q8IVV8 208 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 SFTPA1Q8IWL2 248 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 OR2Y1Q8NGV0 311 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 HSD17B8Q92506 261 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 RAB37Q96AX2 223 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 GPR34Q9UPC5 381 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 WIPI2Q9Y4P8 454 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 TRPM6Q9BX84 2022 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 CLEC18AA5D8T8 446 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 CORTO00230 105 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 VEGFDO43915 354 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PRKNO60260 465 aaPredicted RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 MDH2P40926 338 aaKnown RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 MEOX1P50221 254 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 HERPUD1Q15011 391 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 LTC4SQ16873 150 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 HFEQ30201 348 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 FAM71E1Q6IPT2 247 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 TMEM151BQ8IW70 566 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 CLEC18CQ8NCF0 446 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 DEFB126Q9BYW3 111 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 KCNK7Q9Y2U2 307 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 KCNE3Q9Y6H6 103 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 A0A0C4DFX4 3053 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PRAMEF25A6NGN4 478 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 NPIPB9F8W1W9 429 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 UBE2NP61088 152 aaKnown RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 SIGLEC14Q08ET2 396 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 MFAP5Q13361 173 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 IRF3Q14653 427 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PABPC1L2AQ5JQF8 200 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PRAMEF5Q5TYX0 476 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 PRAMEF6Q5VXH4 476 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 OTPQ5XKR4 325 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 MAMSTRQ6ZN01 415 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 NUDT10Q8NFP7 164 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 OR1L6Q8NGR2 347 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 OR5C1Q8NGR4 320 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 ADAMTS18Q8TE60 1221 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 TM4SF18Q96CE8 201 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 ACY3Q96HD9 319 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 TMEM106CQ9BVX2 250 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 BARHL1Q9BZE3 327 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 GLIPR2Q9H4G4 154 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 STARD5Q9NSY2 213 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 MTFP1Q9UDX5 166 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 DICER1Q9UPY3 1922 aaKnown RBP8.28□□□□□ -1.08
SMC6-207ENST00000448223 DOCK4Q8N1I0 1966 aa8.28□□□□□ -1.08
SMC6-207ENST00000448223 C9orf170A2RU37 121 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 LDB3O75112 727 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 GCM2O75603 506 aaPredicted RBP8.27□□□□□ -1.08
SMC6-207ENST00000448223 TNFP01375 233 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 CD14P08571 375 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 GSTP1P09211 210 aaKnown RBP8.27□□□□□ -1.08
SMC6-207ENST00000448223 IL10RAQ13651 578 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 TMEM215Q68D42 235 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 SLC25A34Q6PIV7 304 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 NXPE3Q969Y0 559 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 SERINC2Q96SA4 455 aa8.27□□□□□ -1.08
SMC6-207ENST00000448223 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 OR2W5A6NFC9 320 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 OR5B21A6NL26 309 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 FFAR1O14842 300 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 RNGTTO60942 597 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 HIST1H1EP10412 219 aaKnown RBP8.27□□□□□ -1.09
SMC6-207ENST00000448223 MVDP53602 400 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 TFAP2EQ6VUC0 442 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 LANCL3Q6ZV70 420 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 ARL17AQ8IVW1 177 aa8.27□□□□□ -1.09
SMC6-207ENST00000448223 OR5D13Q8NGL4 314 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms