RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 GSX2Q9BZM3 304 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 FAM192AQ9GZU8 254 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 RBM38Q9H0Z9 239 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 CNTD2Q9H8S5 307 aa15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-203ENST00000447216 TMEM225BP0DP42 221 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 PAX1P15863 534 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 EGR1P18146 543 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 TMBIM6P55061 237 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 PDZK1IP1Q13113 114 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 FAM201AQ5SY85 155 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 GLT8D1Q68CQ7 371 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 C1QL2Q7Z5L3 287 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 OR11L1Q8NGX0 322 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 NDNFQ8TB73 568 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 LRRC29Q8WV35 223 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 TNFAIP8L1Q8WVP5 186 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 ISOC1Q96CN7 298 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 PKIBQ9C010 78 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 V9GY05 133 aa15.16■□□□□ 0.02
TRAPPC4-203ENST00000447216 IGKV1-12A0A0C4DH73 117 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 A0A0G2JK05 382 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 AKR7A2O43488 359 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 NOL3O60936 208 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 RP2O75695 350 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 IGKV1D-12P01611 117 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 MPZP25189 248 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 CD80P33681 288 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 RPS19P39019 145 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 SPCS2Q15005 226 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 HES5Q5TA89 166 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 TPRA1Q86W33 373 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 ZNF525Q8N782 197 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 C19orf18Q8NEA5 215 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 OR4D6Q8NGJ1 314 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 Q8TCH9 128 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 RAB2BQ8WUD1 216 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 ERGIC1Q969X5 290 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 TMEM106BQ9NUM4 274 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 RNF7Q9UBF6 113 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 ING4Q9UNL4 249 aa15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 MRPS28Q9Y2Q9 187 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-203ENST00000447216 H3BMQ9 156 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 WNT9BO14905 357 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 ZNF205O95201 554 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 PTGFRP43088 359 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 IL24Q13007 206 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 P2RY14Q15391 338 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 HFEQ30201 348 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 C1orf100Q5SVJ3 147 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 CDH26Q8IXH8 852 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 PNLDC1Q8NA58 520 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR51F2Q8NH61 342 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 ZNF671Q8TAW3 534 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 NINJ1Q92982 152 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 C12orf43Q96C57 262 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 MBD6Q96DN6 1003 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 CPNE2Q96FN4 548 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 ELL3Q9HB65 397 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 PLGRKTQ9HBL7 147 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 BARX1Q9HBU1 254 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 MTCH1Q9NZJ7 389 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 POLDIP2Q9Y2S7 368 aa15.14■□□□□ 0.01
TRAPPC4-203ENST00000447216 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 F8VVB4 439 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 F8VWA3 439 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 TMEM178BH3BS89 294 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 PGA5P0DJD9 388 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 CALCBP10092 127 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 CD37P11049 281 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC2A2P11168 524 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 IRF2P14316 349 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 BCL3P20749 454 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 NPBWR2P48146 333 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 CLDN12P56749 244 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 MRPS11P82912 194 aaKnown RBP15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 FOXB2Q5VYV0 432 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 MKXQ8IYA7 352 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 GCSAMQ8N6F7 178 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 POC1AQ8NBT0 407 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR10K1Q8NGX5 313 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR10Z1Q8NGY1 313 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 HPS1Q92902 700 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 FOXRED1Q96CU9 486 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 SEH1LQ96EE3 360 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 UQCC2Q9BRT2 126 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 WDR13Q9H1Z4 485 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 DCSTAMPQ9H295 470 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 KCNK15Q9H427 330 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 DLL4Q9NR61 685 aa15.13■□□□□ 0.01
TRAPPC4-203ENST00000447216 PRRC2AP48634 2157 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 IGHV3OR15-7A0A075B7D8 119 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 A0A0B4J203 849 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 LRRC30A6NM36 301 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 NOTOA8MTQ0 251 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 TRAPPC2LH3BP13 241 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC17A2O00624 439 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 CYB5AP00167 134 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 IL1AP01583 271 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms