RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 OR10S1Q8NGN2 331 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 OIT3Q8WWZ8 545 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 ZNF385AQ96PM9 386 aaKnown RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 A0A0A6YYD4 124 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 CELA2AP08217 269 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 S100GP29377 79 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 EIF1P41567 113 aaKnown RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 EFNA3P52797 238 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 SUMO3P55854 103 aaPredicted RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 CNN3Q15417 329 aaKnown RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 GUK1Q16774 197 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 AAED1Q7RTV5 226 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 WDFY1Q8IWB7 410 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 MAML2Q8IZL2 1156 aaPredicted RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 ZFP62Q8NB50 900 aaPredicted RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 PAPOLGQ9BWT3 736 aaKnown RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 SEC11CQ9BY50 192 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 RAB33BQ9H082 229 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 ZDBF2Q9HCK1 2354 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 A6NLC8 198 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 FIGNL2A6NMB9 653 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 CNOT4O95628 575 aaKnown RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 DUSP1P28562 367 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 SHBQ15464 509 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 CCDC71LQ8N9Z2 235 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 PLPP5Q8NEB5 264 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 SFT2D1Q8WV19 159 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 IL1F10Q8WWZ1 152 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 SGK3Q96BR1 496 aa10.44□□□□□ -0.74
MSH6-204ENST00000445503 ZNF501Q96CX3 271 aaPredicted RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 MYOZ1Q9NP98 299 aaPredicted RBP10.44□□□□□ -0.74
MSH6-204ENST00000445503 XIRP2A4UGR9 3374 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 hCG_1809904A0A1W2PP81 198 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PR64 198 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PRV1 198 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 NUDT19A8MXV4 375 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 MASP2O00187 686 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 LDLRAD4O15165 306 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 DHRS3O75911 302 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 TIAF1O95411 115 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ONECUT2O95948 504 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 FHITP49789 147 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 RBP2P50120 134 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ZP4Q12836 540 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ZNF774Q6NX45 483 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 LGI3Q8N145 548 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 SLC30A7Q8NEW0 376 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 RASL10BQ96S79 203 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ST3GAL6Q9Y274 331 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 PCNX3Q9H6A9 2034 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 C5orf63A6NC05 138 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 CST7O76096 145 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 P04436 131 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 CSRP1P21291 193 aaKnown RBP10.43□□□□□ -0.74
MSH6-204ENST00000445503 S100A2P29034 98 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 PTGER4P35408 488 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 MEOX2P50222 304 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 PLPPR5Q32ZL2 321 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 AKR1C8PQ5T2L2 129 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 OR6X1Q8NH79 312 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 SLC25A43Q8WUT9 341 aaPredicted RBP10.43□□□□□ -0.74
MSH6-204ENST00000445503 TCTEX1D2Q8WW35 142 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 WBP1Q96G27 269 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 DNAH14Q0VDD8 3507 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 A0A1W2PPH5 198 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ZNF814B7Z6K7 855 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 E5RGE8 158 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 CCL7P80098 99 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 ZNF845Q96IR2 970 aaPredicted RBP10.43□□□□□ -0.74
MSH6-204ENST00000445503 NSG2Q9Y328 171 aa10.43□□□□□ -0.74
MSH6-204ENST00000445503 MELTFP08582 738 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PGA4P0DJD7 388 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PGA3P0DJD8 388 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 THBS4P35443 961 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 RHEBQ15382 184 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 AWAT1Q58HT5 328 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 PDZD11Q5EBL8 140 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 DNM1P46Q6ZS02 220 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 RABEPKQ7Z6M1 372 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 APCDD1LQ8NCL9 501 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 AKIRIN1Q9H9L7 192 aaPredicted RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 RCL1Q9Y2P8 373 aaKnown RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 MMP24Q9Y5R2 645 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 IGHV3-64DA0A0J9YX35 117 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 WIPF3A6NGB9 483 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 GPR37O15354 613 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 TUBG1P23258 451 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 G0S2P27469 103 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 CHATP28329 748 aa10.42□□□□□ -0.74
MSH6-204ENST00000445503 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
MSH6-204ENST00000445503 DVL1P1P54792 670 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms