RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TRAPPC2LH3BP13 241 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 H7C417 338 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RAB27BO00194 218 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 GAPDHSO14556 408 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 RBFOX2O43251 390 aaKnown RBP eCLIP2.48□□□□□ -2.01
LIG4-203ENST00000442234 GSTZ1O43708 216 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 EIF4EBP3O60516 100 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 RAMP1O60894 148 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR6A2O95222 327 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MT-CO3P00414 261 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CT45A8P0DMV1 189 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CT45A9P0DMV2 189 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 HKR1P10072 659 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 GUCA1AP43080 201 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 TAS2R43P59537 309 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SNRPNP63162 240 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 CDC42EP1Q00587 391 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PAX2Q02962 417 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF92Q03936 586 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 HGFACQ04756 655 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SQSTM1Q13501 440 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MPV17LQ2QL34 196 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZNF750Q32MQ0 723 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ACOT6Q3I5F7 207 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 CT45A2Q5DJT8 189 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RPL7L1Q6DKI1 246 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 WBP2NLQ6ICG8 309 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CLEC18BQ6UXF7 455 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 DPY19L4Q7Z388 723 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RBM45Q8IUH3 476 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 SFTPA2Q8IWL1 248 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 LAS2Q8IYD9 372 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 KIR2DL5AQ8N109 375 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C10orf111Q8N326 155 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 C17orf78Q8N4C9 275 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 STPG4Q8N801 248 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CLEC18CQ8NCF0 446 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR9A4Q8NGU2 314 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 RHEBL1Q8TAI7 183 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ADAMTS17Q8TE56 1095 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MYEOVQ96EZ4 313 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR6C1Q96RD1 312 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SIGMAR1Q99720 223 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SYT3Q9BQG1 590 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC25A21Q9BQT8 299 aaPredicted RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 NICN1Q9BSH3 213 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 DERL1Q9BUN8 251 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 CST11Q9H112 138 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC25A18Q9H1K4 315 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 ZDHHC11Q9H8X9 412 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SLC6A13Q9NSD5 602 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SS18L2Q9UHA2 77 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 AK3Q9UIJ7 227 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 PCTPQ9UKL6 214 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SF3B6Q9Y3B4 125 aaKnown RBP2.48□□□□□ -2.01
LIG4-203ENST00000442234 OR51B4Q9Y5P0 310 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 SIPA1L1O43166 1804 aa2.48□□□□□ -2.01
LIG4-203ENST00000442234 MYOFQ9NZM1 2061 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TRAV18A0A075B6X5 111 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 LOC105371242A0A075B767 164 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 NPIPA5A0A0B4J1W7 369 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TRGV8A0A0C4DH27 118 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 IGHV2-70DA0A0C4DH43 119 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TRBV4-1A0A0J9YWV2 114 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 A0A1B0GU03 582 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 FAM230AA0A1W2PPH8 454 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 GAGE12BA1L429 117 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 B9A039 149 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 FAAHO00519 579 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 NKX2-8O15522 239 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 FGF17O60258 216 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TNFSF13O75888 250 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 IL18BPO95998 194 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 B3GALT4O96024 378 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 EDN1P05305 212 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 CTSDP07339 412 aaPredicted RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 CTSLP07711 333 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 CELA2BP08218 269 aaPredicted RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 LIMS3P0CW19 117 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 LIMS4P0CW20 117 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 SNHG28P0DPA3 235 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ALPPL2P10696 532 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 GABRG2P18507 467 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 OTX2P32243 289 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 PRSS3P35030 304 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 PTGER4P35408 488 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 P2RX1P51575 399 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 EFNA5P52803 228 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 UCP2P55851 309 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TMEM33P57088 247 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TPPP2P59282 170 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ACSM2AQ08AH3 577 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 DHRS2Q13268 280 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 SPATA45Q537H7 98 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ACSM2BQ68CK6 577 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ZNF627Q7L945 461 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 GPRIN1Q7Z2K8 1008 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 MRPL21Q7Z2W9 205 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms