RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
CSNK1E-210ENST00000442216 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
CSNK1E-210ENST00000442216 SETD2Q9BYW2 2564 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-210ENST00000442216 AKR7A2O43488 359 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 ADAM20O43506 726 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 GYPAP02724 150 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 MT-ND2P03891 347 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 CD1AP06126 327 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 PGA5P0DJD9 388 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 RBP2P50120 134 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 ATP1B3P54709 279 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 SLC35A2P78381 396 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 HOXA4Q00056 320 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 WDR25Q64LD2 544 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 STUMQ69YW2 141 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 DMKNQ6E0U4 476 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 XAF1Q6GPH4 301 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 POC1AQ8NBT0 407 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 OR5D14Q8NGL3 314 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 GPR148Q8TDV2 347 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 TMIGD2Q96BF3 282 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 ZNF281Q9Y2X9 895 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 PCDHGB5Q9Y5G0 923 aa12.53□□□□□ -0.4
CSNK1E-210ENST00000442216 IGHV3OR15-7A0A075B7D8 119 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 IGKV1-9A0A0C4DH69 117 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 PTGES3LE9PB15 166 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 GPR37O15354 613 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 LALBAP00709 142 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 CD2P06729 351 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 AZGP1P25311 298 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 BDH1Q02338 343 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 PAX2Q02962 417 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 ACSM1Q08AH1 577 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 CD276Q5ZPR3 534 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 FAHD2BQ6P2I3 314 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 LHFPL2Q6ZUX7 228 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 CALHM1Q8IU99 346 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 FAHD2AQ96GK7 314 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF184Q99676 751 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 MND1Q9BWT6 205 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 WDR13Q9H1Z4 485 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 NLKQ9UBE8 527 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 CTSZQ9UBR2 303 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 INSIG2Q9Y5U4 225 aa12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
CSNK1E-210ENST00000442216 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 TRAPPC2LH3BP13 241 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 TMPRSS2O15393 492 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 PHF1O43189 567 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 SYNGR1O43759 233 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 SRD5A1P18405 259 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 SMIM21Q3B7S5 101 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 YIF1BQ5BJH7 314 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 RBM48Q5RL73 367 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF788Q6ZQV5 615 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 ANGPTL6Q8NI99 470 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 NPRL2Q8WTW4 380 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 RAB40AQ8WXH6 277 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 RGP1Q92546 391 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 DACT3Q96B18 629 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 MED30Q96HR3 178 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 DMRTB1Q96MA1 342 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 OPALINQ96PE5 141 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 Q9H521 79 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 HES4Q9HCC6 221 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 SIRT4Q9Y6E7 314 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-210ENST00000442216 IGHV2-70DA0A0C4DH43 119 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 NKX6-3A6NJ46 265 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 OR2AT4A6NND4 320 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 DENRO43583 198 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 SULT1B1O43704 296 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 ECDO95905 644 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 LIPFP07098 398 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 OCM2P0CE71 109 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 OCMP0CE72 109 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 PPIAL4GP0DN37 164 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 CRHBPP24387 322 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 MTCP1P56278 107 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 ERVK11-1P61568 191 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 PAX8Q06710 450 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 IRF3Q14653 427 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 ZNF529Q6P280 563 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 ANGPTL5Q86XS5 388 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
CSNK1E-210ENST00000442216 Q8IYB0 196 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms