RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SAMD13Q5VXD3 122 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TMEM205Q6UW68 189 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SSX6Q7RTT6 188 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC39A11Q8N1S5 342 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 JAGN1Q8N5M9 183 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 METTL13Q8N6R0 699 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR6N1Q8NGY5 312 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TNFAIP8L1Q8WVP5 186 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DNAJC9Q8WXX5 260 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR8D1Q8WZ84 308 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 NUS1Q96E22 293 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF641Q96N77 438 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF382Q96SR6 550 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 FAIM2Q9BWQ8 316 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ACTR3CQ9C0K3 210 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CHST5Q9GZS9 411 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 NHEJ1Q9H9Q4 299 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 FGF22Q9HCT0 170 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 EXOSC3Q9NQT5 275 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DDIT4Q9NX09 232 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GLTPQ9NZD2 209 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 PRODH2Q9UF12 536 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 LSM7Q9UK45 103 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GLI3P10071 1580 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 UGGT1Q9NYU2 1555 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CCDC144AA2RUR9 1427 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SETD5Q9C0A6 1442 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 WDR90Q96KV7 1748 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 USP47Q96K76 1375 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 KDM5AP29375 1690 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ASTN1O14525 1302 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 MROH7Q68CQ1 1323 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 A0A1B0GW55 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 PRORSD1PA6NEY8 169 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DHRS7CA6NNS2 312 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 H3BQF6 201 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SIRPB1O00241 398 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CA11O75493 328 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DCTN3O75935 186 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 HLA-AP01891 365 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 AMBPP02760 352 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CD55P08174 381 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SNRPCP09234 159 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L2P0CJ85 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L3P0CJ86 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L4P0CJ87 422 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L5P0CJ88 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L6P0CJ89 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L7P0CJ90 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF17P17021 662 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GRPRP30550 384 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 UGT2B15P54855 530 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF121P58317 390 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GNG3P63215 75 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 RPL36AP83881 106 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR10J3Q5JRS4 329 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4L9Q6RFH8 374 aaPredicted RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TCF24Q7RTU0 167 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 C4orf32Q8N8J7 132 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR51S1Q8NGJ8 323 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GNPDA2Q8TDQ7 276 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SFT2D1Q8WV19 159 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ACOT12Q8WYK0 555 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 TMEM203Q969S6 136 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 VOPP1Q96AW1 172 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 SMIM19Q96E16 107 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 KCTD7Q96MP8 289 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DEFB129Q9H1M3 183 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 HMG20AQ9NP66 347 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 RASL12Q9NYN1 266 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DUX4Q9UBX2 424 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 GLS2Q9UI32 602 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 CD84Q9UIB8 345 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 DNAJC12Q9UKB3 198 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 ANGPT4Q9Y264 503 aa3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 RCL1Q9Y2P8 373 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-207ENST00000441725 PRDM15P57071 1507 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 FAM135AQ9P2D6 1515 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 MLH3Q9UHC1 1453 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 CACNA1FO60840 1977 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 MYH3P11055 1940 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 KIR2DS1A0A191URI9 304 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 TCRBV9S1A1TA0A576 114 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 RPL37AP8A6NKH3 93 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 C5orf58C9J3I9 102 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 TCF21O43680 179 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 ENTPD6O75354 484 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 UGT2B17O75795 530 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 SUPT7LO94864 414 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 LYPD3O95274 346 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 BPGMP07738 259 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 METTL15P1P0C7V9 234 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 HIST1H1CP16403 213 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 CELP19835 753 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 CASP1P29466 404 aa3.26□□□□□ -1.89
CDC42BPA-207ENST00000441725 GCLMP48507 274 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms