RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 THBS4P35443 961 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 AKR1C3P42330 323 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 NOVA1P51513 510 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 RPS18P62269 152 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 RSU1Q15404 277 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 RPUSD3Q6P087 351 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 C5orf24Q7Z6I8 188 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 TMEM123Q8N131 208 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 SCGB3A2Q96PL1 93 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 DUSP23Q9BVJ7 150 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 TMEM100Q9NV29 134 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 HS3ST3B1Q9Y662 390 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 ADAMTS9Q9P2N4 1935 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 IGHV1-45A0A0A0MS14 117 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 FIGNL2A6NMB9 653 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 DIRAS3O95661 229 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 OR5H8P0DN80 308 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 LIFP15018 202 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 SPINK2P20155 84 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 CBX5P45973 191 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 IFI44Q8TCB0 444 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 RHOFQ9HBH0 211 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 UQCC1Q9NVA1 299 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 AK3Q9UIJ7 227 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 V9GYS6 101 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
HERPUD1-204ENST00000439977 CCDC187A0A096LP49 1063 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 SERPINE3A8MV23 424 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 KLK3P07288 261 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 HKR1P10072 659 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 UQCC3Q6UW78 93 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 AQP10Q96PS8 301 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 MLXQ9UH92 298 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 C9JQL5 133 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 H7C2Y5 167 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 K7EPK0 472 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 GEMIN2O14893 280 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 XRCC2O43543 280 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 KLF7O75840 302 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 IGLV3-1P01715 115 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 PRKACAP17612 351 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 RPL12P30050 165 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 RPL35P42766 123 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 PIGPP57054 158 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 CCDC157Q569K6 752 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 SGPP2Q8IWX5 399 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 MAML2Q8IZL2 1156 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 ZFP82Q8N141 532 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 PP6455Q8WZ26 134 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 TMEM54Q969K7 222 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 MARS2Q96GW9 593 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 SULT4A1Q9BR01 284 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 PADI1Q9ULC6 663 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 ADAMTS20P59510 1910 aa11.81□□□□□ -0.52
HERPUD1-204ENST00000439977 A0A0U1RQV5 110 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 A0A1B0GV50 99 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 SGCEO43556 437 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 COX6A1P12074 109 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 CTSSP25774 331 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 CD80P33681 288 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ASCL1P50553 236 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 SSR4P51571 173 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 NAAAQ02083 359 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 GGNBP1Q5YKI7 109 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 OPN5Q6U736 354 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 RPS19BP1Q86WX3 136 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 FGFBP3Q8TAT2 258 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 FNDC9Q8TBE3 224 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 C2CD4CQ8TF44 421 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 SPTSSAQ969W0 71 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 SIT1Q9Y3P8 196 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 PCDHGA1Q9Y5H4 931 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 AHCTF1Q8WYP5 2266 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 TRAPPC6AO75865 159 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 IL32P24001 234 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 FCGR2CP31995 323 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 TMEM33P57088 247 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 PJVKQ0ZLH3 352 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 IL15RAQ13261 267 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 Q96M66 194 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 CMSS1Q9BQ75 279 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 MMP26Q9NRE1 261 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 SHANK1Q9Y566 2161 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 LOC102725191A0A1B0GVB3 256 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 RFPL3SP0C7P2 107 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ZNF32P17041 273 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ZNF84P51523 738 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 DSCR4P56555 118 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 C10orf128Q5T292 105 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms