RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SNX5Q9Y5X3 404 aa13.34□□□□□ -0.27
SNRPD3-204ENST00000439775 A0A1B0GTI1 187 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 PGA5P0DJD9 388 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 CCL1P22362 96 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 HAAOP46952 286 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 UBE2E1P51965 193 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 ACSM1Q08AH1 577 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 KLRD1Q13241 179 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 BLMHQ13867 455 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 TMEM185AQ8NFB2 350 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 OR51G2Q8NGK0 314 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 OR14K1Q8NGZ2 314 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 SEMA6AQ9H2E6 1030 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 POLDIP2Q9Y2S7 368 aa13.33□□□□□ -0.28
SNRPD3-204ENST00000439775 PQLC2LA1A4F0 135 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 BTBD17A6NE02 478 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 MAGEB4O15481 346 aaPredicted RBP13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 MPZP25189 248 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 HTR1FP30939 366 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 SAA4P35542 130 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 DLX1P56177 255 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 TAF9Q16594 264 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 PLEKHG7Q6ZR37 379 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 CITED1Q99966 193 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 NRIP2Q9BQI9 281 aa13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 ELL3Q9HB65 397 aaPredicted RBP13.32□□□□□ -0.28
SNRPD3-204ENST00000439775 RFPL4AA6NLU0 287 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 RFPL4AL1F8VTS6 287 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 WIPF1O43516 503 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 SYNGR1O43759 233 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 PAHP00439 452 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 KRT8P05787 483 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OR2T7P0C7T2 308 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 PRB3Q04118 309 aaPredicted RBP13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OCLNQ16625 522 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 SSX6Q7RTT6 188 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OR2T27Q8NH04 317 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OR5R1Q8NH85 324 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 CENPNQ96H22 339 aaPredicted RBP13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OSBPL10Q9BXB5 764 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 GPR173Q9NS66 373 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 OAZ3Q9UMX2 235 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 RNF114Q9Y508 228 aa13.31□□□□□ -0.28
SNRPD3-204ENST00000439775 A0A1W2PQL4 384 aaPredicted RBP13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 MEIOCA2RUB1 952 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 H0YAE9 185 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 SLC1A7O00341 560 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 SULT1C4O75897 302 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 CLPXO76031 633 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 NXPH2O95156 264 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 CAPZA1P52907 286 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 SRSF4Q08170 494 aaKnown RBP13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 TMED1Q13445 227 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 MIDNQ504T8 468 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 HCP5Q6MZN7 132 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 BRICD5Q6PL45 260 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 CATSPERDQ86XM0 798 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 PNKDQ8N490 385 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 CD177Q8N6Q3 437 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 OR8J1Q8NGP2 316 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 ZNF488Q96MN9 340 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 PKIBQ9C010 78 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 PLEKHA1Q9HB21 404 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 SLC22A13Q9Y226 551 aa13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 SF3B6Q9Y3B4 125 aaKnown RBP13.3□□□□□ -0.28
SNRPD3-204ENST00000439775 A0A1W2PPH5 198 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 A0A1W2PRD5 423 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 A0A1W2PRF3 423 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 A0A1W2PRM7 423 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 ANKRD61A6NGH8 418 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 RPP14O95059 124 aaKnown RBP13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 PRDX2P32119 198 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 POLR2IP36954 125 aaKnown RBP13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 PROK1P58294 105 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 IL24Q13007 206 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 DHRS7BQ6IAN0 325 aaPredicted RBP13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 Q6ZSV7 163 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 ASRGL1Q7L266 308 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 BEND2Q8NDZ0 799 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 CCDC54Q8NEL0 328 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 RFKQ969G6 155 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 TBX5Q99593 518 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 RBM4BQ9BQ04 359 aaKnown RBP13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 RIBC2Q9H4K1 309 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
SNRPD3-204ENST00000439775 METTL15A6NJ78 407 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms