RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ANGPTL8Q6UXH0 198 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 WDR82Q6UXN9 313 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 ITFG1Q8TB96 612 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 ISG20Q96AZ6 181 aaKnown RBP1.96□□□□□ -2.1
VPS41-207ENST00000439468 BTN2A3PQ96KV6 586 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 C9orf72Q96LT7 481 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 NAP1L5Q96NT1 182 aaPredicted RBP1.96□□□□□ -2.1
VPS41-207ENST00000439468 CSPG4P5Q96PW8 444 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 LZTS2Q9BRK4 669 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 CALN1Q9BXU9 219 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 DEFB129Q9H1M3 183 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 BLZF1Q9H2G9 400 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 NCOR1P1Q9H4R4 102 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 ZC4H2Q9NQZ6 224 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 NSD3Q9BZ95 1437 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 RELNP78509 3460 aa1.96□□□□□ -2.1
VPS41-207ENST00000439468 COL27A1Q8IZC6 1860 aaPredicted RBP1.96□□□□□ -2.1
VPS41-207ENST00000439468 ZFHX2Q9C0A1 2572 aaPredicted RBP1.96□□□□□ -2.1
VPS41-207ENST00000439468 TPRP12270 2363 aaKnown RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 ACACBO00763 2458 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 BPTFQ12830 3046 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 IGHV3-72A0A0B4J1Y9 119 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 IGHV3OR16-9A0A0B4J2B5 98 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 A0A1W2PQ67 120 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SERPINE3A8MV23 424 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 RPL36A-HNRNPH2H7BZ11 118 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 CHST10O43529 356 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 XRCC2O43543 280 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 FARS2O95363 451 aaKnown RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 GLAP06280 429 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 DCNP07585 359 aaKnown RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 C1GALT1C1LP0DN25 315 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 GZMAP12544 262 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SRMP19623 302 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 RAB5AP20339 215 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 ME2P23368 584 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 CFHR2P36980 270 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 PEX19P40855 299 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 UBE2E1P51965 193 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 CLDN18P56856 261 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 PAFAH1B2P68402 229 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 LCN2P80188 198 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SPAG1Q07617 926 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SIGLEC14Q08ET2 396 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 PNOCQ13519 176 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 TFDP2Q14188 446 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 KLHL40Q2TBA0 621 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 COX19Q49B96 90 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 KDM4DQ6B0I6 523 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 OPN5Q6U736 354 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 LINC00336Q6ZUF6 198 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 MRPL21Q7Z2W9 205 aaKnown RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 RAB43Q86YS6 212 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 H1FOOQ8IZA3 346 aaPredicted RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 ZNF321PQ8N8H1 164 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 OR1J4Q8NGS1 313 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 OR10G6Q8NH81 332 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 RXFP4Q8TDU9 374 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 PIH1D2Q8WWB5 315 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SLC25A46Q96AG3 418 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 UBE2E2Q96LR5 201 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 BCL7BQ9BQE9 202 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 AGMATQ9BSE5 352 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 ZNF2Q9BSG1 426 aaPredicted RBP1.95□□□□□ -2.1
VPS41-207ENST00000439468 ING2Q9H160 280 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 CLSTN2Q9H4D0 955 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 CD209Q9NNX6 404 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SAR1BQ9Y6B6 198 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 SLX4Q8IY92 1834 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 NCOR2Q9Y618 2525 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 COL4A6Q14031 1691 aa1.95□□□□□ -2.1
VPS41-207ENST00000439468 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 ANKRD12Q6UB98 2062 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 PPIP5K1Q6PFW1 1433 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 ZNF850A8MQ14 1090 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 TNFRSF11BO00300 401 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 THRAP10827 490 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 PMCHP20382 165 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 GABRR2P28476 465 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 CMC4P56277 68 aaPredicted RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 ZNF816Q0VGE8 651 aaPredicted RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 PIGHQ14442 188 aaPredicted RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 SHHQ15465 462 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 HADHQ16836 314 aaKnown RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 C5orf64Q2M2E5 130 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 OR2T5Q6IEZ7 315 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 SLC25A34Q6PIV7 304 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 RNF182Q8N6D2 247 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 PROKR2Q8NFJ6 384 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 OR2T29Q8NH02 315 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 TCP10LQ8TDR4 215 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 NAT6Q93015 286 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 RERGQ96A58 199 aaPredicted RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 OR4K3Q96R72 315 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 DOK1Q99704 481 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 GABRG3Q99928 467 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 RSG1Q9BU20 258 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 FBXO44Q9H4M3 255 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 CHRAC1Q9NRG0 131 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 TMEM100Q9NV29 134 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms