RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 IKZF2Q9UKS7 526 aa6.35□□□□□ -1.39
VPS50-204ENST00000438395 POLDIP2Q9Y2S7 368 aa6.35□□□□□ -1.39
VPS50-204ENST00000438395 LRP12Q9Y561 859 aa6.35□□□□□ -1.39
VPS50-204ENST00000438395 TMEM14AQ9Y6G1 99 aa6.35□□□□□ -1.39
VPS50-204ENST00000438395 A0A0U1RQV5 110 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 TMEM269A0A1B0GVZ9 245 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 TCRBV5S2A0A599 114 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ACOD1A6NK06 481 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ZNF732B4DXR9 585 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 PEX14O75381 377 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 MTRF1O75570 445 aaKnown RBP6.34□□□□□ -1.39
VPS50-204ENST00000438395 FCN3O75636 299 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 NXPH2O95156 264 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ATP6V1B1P15313 513 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 COX7A1P24310 79 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 DLX1P56177 255 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 KRTAP10-3P60369 221 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 RPL31P62899 125 aaKnown RBP6.34□□□□□ -1.39
VPS50-204ENST00000438395 CBX1P83916 185 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 RIPPLY1Q0D2K3 151 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 GINS1Q14691 196 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ZNF124Q15973 351 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 CEACAM21Q3KPI0 293 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 CEP78Q5JTW2 689 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 SLC35D3Q5M8T2 416 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 SLC35E4Q6ICL7 350 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 HAGHLQ6PII5 290 aaPredicted RBP6.34□□□□□ -1.39
VPS50-204ENST00000438395 ZNF573Q86YE8 665 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 CPOQ8IVL8 374 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 Q8N7P7 452 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ZNRF1Q8ND25 227 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 HPSE2Q8WWQ2 592 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ASB17Q8WXJ9 295 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ASB9Q96DX5 294 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 NSL1Q96IY1 281 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 NIPSNAP1Q9BPW8 284 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 CHID1Q9BWS9 393 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 RANBP3Q9H6Z4 567 aaPredicted RBP6.34□□□□□ -1.39
VPS50-204ENST00000438395 PPP1R3EQ9H7J1 279 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ABCB10Q9NRK6 738 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 RASL12Q9NYN1 266 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ZNF319Q9P2F9 582 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 ENPP5Q9UJA9 477 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 MAB21L2Q9Y586 359 aa6.34□□□□□ -1.39
VPS50-204ENST00000438395 IGKV1D-17A0A075B6S4 117 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 LOC110117498-PIK3R3F6TDL0 507 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 H3BS24 57 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 H3BUI4 141 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 J3QT63 122 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 ZNF254O75437 659 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 RHBDL1O75783 438 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 NRASP01111 189 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 TFF1P04155 84 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 ALDOBP05062 364 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 MRPL3P09001 348 aaKnown RBP6.33□□□□□ -1.4
VPS50-204ENST00000438395 VSIG10L2P0DP72 767 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 PSG2P11465 335 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 OSMP13725 252 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 FAHP16930 419 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 AMY2BP19961 511 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 CALB2P22676 271 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 RIDAP52758 137 aaKnown RBP6.33□□□□□ -1.4
VPS50-204ENST00000438395 ERVFRD-1P60508 538 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 ACTR3P61158 418 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 APOFQ13790 326 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 SNAPC1Q16533 368 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 AANATQ16613 207 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 BCL2L15Q5TBC7 163 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 DEGS2Q6QHC5 323 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 MOB3CQ70IA8 216 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 ZNF561Q8N587 486 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 C11orf44Q8N8P7 122 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 OR4S1Q8NGB4 309 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 OR5A2Q8NGI9 324 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 OR51E1Q8TCB6 317 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 AQP3Q92482 292 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 TNFRSF14Q92956 283 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 FOXRED1Q96CU9 486 aaPredicted RBP6.33□□□□□ -1.4
VPS50-204ENST00000438395 SDSLQ96GA7 329 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 CNN2Q99439 309 aaKnown RBP6.33□□□□□ -1.4
VPS50-204ENST00000438395 YIPF3Q9GZM5 350 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 PBOV1Q9GZY1 135 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 OR51I2Q9H344 312 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 MOB1AQ9H8S9 216 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 PLEKHA1Q9HB21 404 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 GPR84Q9NQS5 396 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 TAS2R1Q9NYW7 299 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 USE1Q9NZ43 259 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 FBLN5Q9UBX5 448 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 PIGLQ9Y2B2 252 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 KLHDC2Q9Y2U9 406 aa6.33□□□□□ -1.4
VPS50-204ENST00000438395 RFPL4AA6NLU0 287 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 RFPL4AL1F8VTS6 287 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 PSMD9O00233 223 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 XPNPEP2O43895 674 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 DHRS3O75911 302 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 FAM107AO95990 144 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 OPN1MWP04001 364 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 OPN1MW2P0DN77 364 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms