RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ARHGEF9O43307 516 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 TRIM3O75382 744 aaPredicted RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 SAP30O75446 220 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 HPP00738 406 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 CCL3P10147 92 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 PSKH1P11801 424 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 TCN2P20062 427 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 ACVR1BP36896 505 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 PTGFRP43088 359 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 GDI2P50395 445 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 SSR4P51571 173 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 DVL1P1P54792 670 aaPredicted RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 RPS11P62280 158 aaKnown RBP eCLIP5.34□□□□□ -1.55
SPEN-202ENST00000438066 GAGE5Q13069 117 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 GAGE6Q13070 117 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 EIF3IQ13347 325 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 OXA1LQ15070 435 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 ZNF79Q15937 498 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 ZNF181Q2M3W8 571 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 MS4A18Q3C1V0 323 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 ANKRD55Q3KP44 614 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 CCDC58Q4VC31 144 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 SPATA46Q5T0L3 261 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 PRAMEF20Q5VT98 475 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 H3F3CQ6NXT2 135 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 RPL22L1Q6P5R6 122 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 RPS19BP1Q86WX3 136 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 CENPSQ8N2Z9 138 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 MS4A15Q8N5U1 240 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 GHSRQ92847 366 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 MRPL48Q96GC5 212 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 SDHCQ99643 169 aaPredicted RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 SLC30A2Q9BRI3 323 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 ANGPTL4Q9BY76 406 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 VCX2Q9H322 139 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 CALHM2Q9HA72 323 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 GNG8Q9UK08 70 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 TRAPPC4Q9Y296 219 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 UGT2A1Q9Y4X1 527 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 FKBP7Q9Y680 259 aa5.34□□□□□ -1.55
SPEN-202ENST00000438066 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 CNOT1A5YKK6 2376 aaKnown RBP5.34□□□□□ -1.55
SPEN-202ENST00000438066 A0A1W2PRG6 482 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 ISPDA4D126 451 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CLEC18AA5D8T8 446 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CASKO14936 926 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 UPK3AO75631 287 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 DFFBO76075 338 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 FSHBP01225 129 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 LIFP15018 202 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CTLA4P16410 223 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 ALOX5APP20292 161 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 OTX2P32243 289 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 EIF1P41567 113 aaKnown RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 P2RY4P51582 365 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CAV3P56539 151 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 SELENBP1Q13228 472 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 OR1C1Q15619 314 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 OR7A5Q15622 319 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 ZNF239Q16600 458 aaKnown RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 GLYR1Q49A26 553 aaPredicted RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 FAM27D1Q5T7N8 215 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 DDI2Q5TDH0 399 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 UNQ6126/PRO20091Q6UXV3 157 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 PLEKHG7Q6ZR37 379 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 RFPL4BQ6ZWI9 263 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CREB3L2Q70SY1 520 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 SLC22A16Q86VW1 577 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 PLCZ1Q86YW0 608 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 WDFY1Q8IWB7 410 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CDH26Q8IXH8 852 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 GTPBP8Q8N3Z3 284 aaPredicted RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 CLEC18CQ8NCF0 446 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 OR4K17Q8NGC6 315 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 OTOSQ8NHW6 89 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 AP3S1Q92572 193 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 ZNF48Q96MX3 618 aaPredicted RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 ATF6BQ99941 703 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 CCDC32Q9BV29 185 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 PTGES2Q9H7Z7 377 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 FAIMQ9NVQ4 179 aa5.34□□□□□ -1.56
SPEN-202ENST00000438066 MRPL22Q9NWU5 206 aaKnown RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 MRM2Q9UI43 246 aaKnown RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 FARSAQ9Y285 508 aaKnown RBP5.34□□□□□ -1.56
SPEN-202ENST00000438066 MED13Q9UHV7 2174 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 TVP23AA6NH52 213 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 A6NIZ1 184 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 C21orf140B9A014 251 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 LOC110117498-PIK3R3F6TDL0 507 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 PRRG2O14669 202 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 RGS5O15539 181 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 SERPINA3P01011 423 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 SERPINA7P05543 415 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 UCHL1P09936 223 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 OR8G3PP0DMU2 310 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 ICAM2P13598 275 aa5.33□□□□□ -1.56
SPEN-202ENST00000438066 FKBP2P26885 142 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms