RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 SHBQ15464 509 aa10.4□□□□□ -0.75
PTCH1-209ENST00000437951 PRTGQ2VWP7 1150 aa10.4□□□□□ -0.75
PTCH1-209ENST00000437951 PHOSPHO2Q8TCD6 241 aa10.4□□□□□ -0.75
PTCH1-209ENST00000437951 NUDT16L1Q9BRJ7 211 aaKnown RBP10.4□□□□□ -0.75
PTCH1-209ENST00000437951 STARD5Q9NSY2 213 aa10.4□□□□□ -0.75
PTCH1-209ENST00000437951 B4GALT3O60512 393 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 P01737 135 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 PARM1Q6UWI2 310 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 MUC20Q8N307 709 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 ZADH2Q8N4Q0 377 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 STXBP6Q8NFX7 210 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 MOB3AQ96BX8 217 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TBX15Q96SF7 602 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 NDUFS8O00217 210 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 GUSBP08236 651 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 FAM131CQ96AQ9 280 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 C19orf53Q9UNZ5 99 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 UQCRFS1P47985 274 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 SPATA45Q537H7 98 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 PWWP2BQ6NUJ5 590 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 NWD2Q9ULI1 1742 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TRGV10A0A0A0MS01 117 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 OR2W5A6NFC9 320 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 CST7O76096 145 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 GABRA6Q16445 453 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM183AQ8IXX5 376 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 SCN4AP35499 1836 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 MFSD2BA6NFX1 497 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 FUT3P21217 361 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TIAL1Q01085 375 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM267Q0VDI3 215 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 ELAVL1Q15717 326 aaKnown RBP10.39□□□□□ -0.75
PTCH1-209ENST00000437951 C7orf77A4D0Y5 90 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 FHITP49789 147 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 ABHD17CQ6PCB6 329 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 UBE2FQ969M7 185 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 KIR3DX1Q9H7L2 352 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 P4HTMQ9NXG6 502 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 THYN1Q9P016 225 aa10.39□□□□□ -0.75
PTCH1-209ENST00000437951 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TAPBPO15533 448 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 GPA33Q99795 319 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM189-UBE2V1I3L0A0 370 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 C1SP09871 688 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 ACSM5Q6NUN0 579 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM38BQ9NVV0 291 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 ADAM20O43506 726 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 SLC25A1P53007 311 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 PFN3P60673 137 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 DGAT2L7PQ6IED9 249 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 C9orf62Q8N4C0 152 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TDRD15B5MCY1 1934 aaKnown RBP10.38□□□□□ -0.75
PTCH1-209ENST00000437951 SCN9AQ15858 1988 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 GEMIN2O14893 280 aaKnown RBP10.38□□□□□ -0.75
PTCH1-209ENST00000437951 RER1O15258 196 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 CXorf1O96002 111 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 OR5AS1Q8N127 324 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF346Q9UL40 294 aaKnown RBP10.38□□□□□ -0.75
PTCH1-209ENST00000437951 CDC14CA4D256 554 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 TMPRSS11DO60235 418 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 OPRM1P35372 400 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 EMP1P54849 157 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
PTCH1-209ENST00000437951 RGRP47804 291 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 FAM209AQ5JX71 171 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF384Q8TF68 577 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 SAP30LQ9HAJ7 183 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 MCM3APO60318 1980 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 CCR2P41597 374 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 PEF1Q9UBV8 284 aaKnown RBP10.37□□□□□ -0.75
PTCH1-209ENST00000437951 SLC22A13Q9Y226 551 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 KIF13BQ9NQT8 1826 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 SIRPB1O00241 398 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 CRYABP02511 175 aaKnown RBP10.37□□□□□ -0.75
PTCH1-209ENST00000437951 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 WBP2Q969T9 261 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 FANCMQ8IYD8 2048 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 CTSCP53634 463 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 LIM2P55344 173 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 FBXO46Q6PJ61 603 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-209ENST00000437951 SLC35E3Q7Z769 313 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 TMEM25Q86YD3 366 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 OR5M9Q8NGP3 310 aa10.37□□□□□ -0.75
PTCH1-209ENST00000437951 HHIPQ96QV1 700 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms