RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SLC25A21Q9BQT8 299 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 ZPBPQ9BS86 351 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 NELFAQ9H3P2 528 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 PRELID3BQ9Y3B1 194 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 ARGFXA6NJG6 315 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 KRBOX1C9JBD0 128 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 NEURL1O76050 574 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 CD74P04233 296 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 CYC1P08574 325 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 CASRP41180 1078 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 LUMP51884 338 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 ZNF169Q14929 603 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 IGFBP7Q16270 282 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 ELP2Q6IA86 826 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 GJC3Q8NFK1 279 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 SLC25A43Q8WUT9 341 aaPredicted RBP8.27□□□□□ -1.09
CUX1-206ENST00000437600 NABP1Q96AH0 204 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 C12orf57Q99622 126 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 BCL2L14Q9BZR8 327 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 WNT5BQ9H1J7 359 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 GSKIPQ9P0R6 139 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 MBD2Q9UBB5 411 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 UPB1Q9UBR1 384 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 CSAG2Q9Y5P2 127 aa8.27□□□□□ -1.09
CUX1-206ENST00000437600 NKX2-8O15522 239 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 BPNT1O95861 308 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 IGHEP01854 428 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 CD37P11049 281 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 MGMTP16455 207 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 ADH6P28332 368 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 GMFBP60983 142 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 OVCH2Q7RTZ1 564 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 CCDC107Q8WV48 283 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 PIGQQ9BRB3 760 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 FAAP24Q9BTP7 215 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 ZNF471Q9BX82 626 aaPredicted RBP8.26□□□□□ -1.09
CUX1-206ENST00000437600 ESPL1Q14674 2120 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 CACNA1AO00555 2505 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 TMEM127O75204 238 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 ZBTB25P24278 435 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 MAGEA5P43359 124 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 MTCP1P56278 107 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 OR1C1Q15619 314 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 RAB12Q6IQ22 244 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 OR10D3Q8NH80 312 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 KCNG3Q8TAE7 436 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 S100A13Q99584 98 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 OR51B6Q9H340 312 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 C5orf66Q9H5L9 145 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 GLS2Q9UI32 602 aa8.26□□□□□ -1.09
CUX1-206ENST00000437600 DIDO1Q9BTC0 2240 aaKnown RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 NPIPB13A6NJU9 1138 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CDRT15L2A8MXV6 281 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 NPIPB4C9JG80 1138 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 SULT1C2O00338 296 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 HOXB5P09067 269 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 PGAM2P15259 253 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 HIST1H1DP16402 221 aaKnown RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 ZNF32P17041 273 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CFPP27918 469 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 SERPINF1P36955 418 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 B3GALT5-AS1P59052 145 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 RAC1P63000 192 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CSNK2A1P68400 391 aaPredicted RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 RGS7BPQ6MZT1 257 aaPredicted RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 ZNF529Q6P280 563 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 TMEM123Q8N131 208 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 PNLDC1Q8NA58 520 aaKnown RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 CSNK2A3Q8NEV1 391 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 VRK1Q99986 396 aaPredicted RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 SCNM1Q9BWG6 230 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 ZNF629Q9UEG4 869 aaPredicted RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 ADGRG4Q8IZF6 3080 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 ACACBO00763 2458 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 IGHV3-64DA0A0J9YX35 117 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 AMY2BP19961 511 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 OR3A2P47893 321 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 FOXO1Q12778 655 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CEACAM16Q2WEN9 425 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CLEC9AQ6UXN8 241 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 DOK3Q7L591 496 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 LYG2Q86SG7 212 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 SLC25A42Q86VD7 318 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 SULF2Q8IWU5 870 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 CLRN3Q8NCR9 226 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 TERB2Q8NHR7 220 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 PRRT1Q99946 306 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 OR10A2Q9H208 303 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 COMMD9Q9P000 198 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 GPR160Q9UJ42 338 aa8.25□□□□□ -1.09
CUX1-206ENST00000437600 MCTS1Q9ULC4 181 aaKnown RBP8.25□□□□□ -1.09
CUX1-206ENST00000437600 IGKV1-27A0A075B6S5 117 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 RFPL4AA6NLU0 287 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 RFPL4AL1F8VTS6 287 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 SGCEO43556 437 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 RAB6AP20340 208 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 SRD5A2P31213 254 aa8.24□□□□□ -1.09
CUX1-206ENST00000437600 RBMXP38159 391 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms