RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FAM221AA4D161 298 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 PTBP3O95758 552 aaKnown RBP19.52■□□□□ 0.72
CPSF4-204ENST00000436336 EIF4EP06730 217 aaKnown RBP19.52■□□□□ 0.72
CPSF4-204ENST00000436336 GRPP07492 148 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 RAB6AP20340 208 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 TNFSF4P23510 183 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 RSU1Q15404 277 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 SLC22A6Q4U2R8 563 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 TMEM200AQ86VY9 491 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 RAB40AQ8WXH6 277 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 AQP3Q92482 292 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 TLNRD1Q9H1K6 362 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 ABCG5Q9H222 651 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 MS4A5Q9H3V2 200 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 FAIMQ9NVQ4 179 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 RHBDL2Q9NX52 303 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 IL19Q9UHD0 177 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 RAB22AQ9UL26 194 aa19.52■□□□□ 0.72
CPSF4-204ENST00000436336 IGKV1-12A0A0C4DH73 117 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 FAM25AB3EWG3 89 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 FAM25CB3EWG5 89 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 FAM25GB3EWG6 89 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 IGKV1D-12P01611 117 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 SRP9P49458 86 aaKnown RBP19.51■□□□□ 0.71
CPSF4-204ENST00000436336 PLA2G7Q13093 441 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 UNC119Q13432 240 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 OR10K2Q6IF99 312 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 CCDC190Q86UF4 302 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 S100ZQ8WXG8 99 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 DIRAS2Q96HU8 199 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 MEGF10Q96KG7 1140 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 OR2V2Q96R30 315 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 DYNLRB1Q9NP97 96 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 PCDHB16Q9NRJ7 776 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 POLDIP2Q9Y2S7 368 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 A0A1W2PPR1 153 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 A1L4Q6 167 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 CD55P08174 381 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 ETV6P41212 452 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 SNRPD2P62316 118 aaKnown RBP19.51■□□□□ 0.71
CPSF4-204ENST00000436336 TNFAIP6P98066 277 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-204ENST00000436336 PRAMEF6Q5VXH4 476 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 CDH24Q86UP0 819 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 CMTM4Q8IZR5 234 aa19.51■□□□□ 0.71
CPSF4-204ENST00000436336 FBXO9Q9UK97 447 aaPredicted RBP19.51■□□□□ 0.71
CPSF4-204ENST00000436336 CDIPTO14735 213 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 SYNGR1O43759 233 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 KDM4BO94953 1096 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 CSTBP04080 98 aaKnown RBP19.5■□□□□ 0.71
CPSF4-204ENST00000436336 SERPINA2P20848 420 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 EFNB2P52799 333 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 SPANXN2Q5MJ10 180 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 SP5Q6BEB4 398 aaPredicted RBP19.5■□□□□ 0.71
CPSF4-204ENST00000436336 TMEM104Q8NE00 496 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 OR10K1Q8NGX5 313 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 FAM46BQ96A09 425 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 SLAMF9Q96A28 289 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 S100A16Q96FQ6 103 aaKnown RBP19.5■□□□□ 0.71
CPSF4-204ENST00000436336 AKIP1Q9NQ31 210 aa19.5■□□□□ 0.71
CPSF4-204ENST00000436336 PKDREJQ9NTG1 2253 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 A0A1W2PP11 408 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 CDC14BO60729 498 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 CRTAPO75718 401 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-204ENST00000436336 HTR3BO95264 441 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 BMP4P12644 408 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 TALDO1P37837 337 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 FAM209AQ5JX71 171 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 AGAP6Q5VW22 663 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 CNIH2Q6PI25 160 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 C11orf53Q8IXP5 236 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 ITLN1Q8WWA0 313 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 TMEM59Q9BXS4 323 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 CBLN4Q9NTU7 201 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 MTCH1Q9NZJ7 389 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 EXTL2Q9UBQ6 330 aa19.49■□□□□ 0.71
CPSF4-204ENST00000436336 CACNA1DQ01668 2161 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 IGHV3-64DA0A0J9YX35 117 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 TRAPPC2LH3BP13 241 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 RHBDL1O75783 438 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 MPIG6BO95866 241 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 INHBBP09529 407 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 COX6B1P14854 86 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 MGMTP16455 207 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 GATA4P43694 442 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 MPPED2Q15777 294 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 FAM189A2Q15884 450 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 Q8NFD4 153 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 BANF2Q9H503 90 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 RHOFQ9HBH0 211 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 HMG20AQ9NP66 347 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 METTL21EPA6NDL7 271 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 A6NLC8 198 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 SFTPBP07988 381 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 ACAA1P09110 424 aaPredicted RBP19.48■□□□□ 0.71
CPSF4-204ENST00000436336 DANCRP0C864 163 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 GTF2F2P13984 249 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 PCGF3Q3KNV8 242 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 ELP2Q6IA86 826 aa19.48■□□□□ 0.71
CPSF4-204ENST00000436336 METAP1DQ6UB28 335 aaPredicted RBP19.48■□□□□ 0.71
CPSF4-204ENST00000436336 MRPS24Q96EL2 167 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms