RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SMIM21Q3B7S5 101 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF770Q6IQ21 691 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CCDC121Q6ZUS5 278 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 POC1AQ8NBT0 407 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 OR5A2Q8NGI9 324 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CMC2Q9NRP2 79 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 TAS2R1Q9NYW7 299 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 MEX3AA1L020 520 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 OR5B21A6NL26 309 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 F2RL2O00254 374 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 SYNGR1O43759 233 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 SELENOFO60613 162 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 KRTAP10-11P60412 298 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 SLC35A2P78381 396 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CD69Q07108 199 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 PLCXD3Q63HM9 321 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CENPVQ7Z7K6 275 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 OR13D1Q8NGV5 346 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 OTOSQ8NHW6 89 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 WWC2-AS2Q96NR7 200 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 NIPAL2Q9H841 368 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 OR14J1Q9UGF5 321 aa9.33□□□□□ -0.92
CHRNA1-207ENST00000435083 TCRBV4S1A1TA0A5B7 111 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 C17orf98A8MV24 154 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 GSC2O15499 205 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 TK1P04183 234 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 JUNBP17275 347 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 OR12D2P58182 307 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 LDLRAD2Q5SZI1 272 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 KRT77Q7Z794 578 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 BATF2Q8N1L9 274 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 TEX47Q8TBZ9 253 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 RCC1LQ96I51 464 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 CDRT15Q96T59 188 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 KLHDC2Q9Y2U9 406 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 HILPDAQ9Y5L2 63 aa9.32□□□□□ -0.92
CHRNA1-207ENST00000435083 NXPH2O95156 264 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 PRDX6P30041 224 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 HOXD3P31249 432 aaPredicted RBP9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 DLX6P56179 175 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 SLC34A1Q06495 639 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 RIPPLY1Q0D2K3 151 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 LCN8Q6JVE9 175 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 OR8B4Q96RC9 309 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 DGCR6LQ9BY27 220 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 TSSC4Q9Y5U2 329 aaPredicted RBP9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 U3KQV3 271 aa9.31□□□□□ -0.92
CHRNA1-207ENST00000435083 A0A0U1RQV5 110 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PRR23D1E9PI22 279 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 E9PQ18 207 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 H3BN98 237 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 H3BUI4 141 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 J3QT63 122 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PSMD9O00233 223 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 DUS4LO95620 317 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PGA5P0DJD9 388 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PRR23D2P0DMB1 279 aaPredicted RBP9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 HAAOP46952 286 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 DYNLT3P51808 116 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 EDDM3BP56851 147 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 MICAQ29983 383 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 KHDC1LQ5JSQ8 128 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF684Q5T5D7 378 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PLBD1Q6P4A8 553 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 CYP2R1Q6VVX0 501 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 KRT74Q7RTS7 529 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 TRPM8Q7Z2W7 1104 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 ZNF573Q86YE8 665 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 ASCC1Q8N9N2 400 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 NDNFQ8TB73 568 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 OR51E1Q8TCB6 317 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 MYDGFQ969H8 173 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 MYLK2Q9H1R3 596 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 VNN3Q9NY84 501 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 PIGLQ9Y2B2 252 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 SAMHD1Q9Y3Z3 626 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 RYR3Q15413 4870 aa9.3□□□□□ -0.92
CHRNA1-207ENST00000435083 TMEM269A0A1B0GVZ9 245 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 CLIC3O95833 236 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 NRASP01111 189 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 IGHV1-8P0DP01 117 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 ATP6V1B1P15313 513 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 HCCSP53701 268 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 PGAM4Q8N0Y7 254 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 NIPSNAP1Q9BPW8 284 aa9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 ELAC2Q9BQ52 826 aaKnown RBP9.29□□□□□ -0.92
CHRNA1-207ENST00000435083 REEP1Q9H902 201 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms