RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 NECAP2Q9NVZ3 263 aa11.93□□□□□ -0.5
COL6A3-207ENST00000433762 PI4KAP42356 2102 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 F8W036 122 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 SDCBPO00560 298 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 SGCEO43556 437 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 UMODP07911 640 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF708P17019 499 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 UCP3P55916 312 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 MLF1P58340 268 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 FAM3AP98173 230 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 OR8B8Q15620 311 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 HFEQ30201 348 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 KDF1Q8NAX2 398 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 LYPD6BQ8NI32 183 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF2Q9BSG1 426 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 MCTS1Q9ULC4 181 aaKnown RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 PADI1Q9ULC6 663 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 KCNIP3Q9Y2W7 256 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 NUPL2O15504 423 aaKnown RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 PLATP00750 562 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 CCL3P10147 92 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 PAX6P26367 422 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 SRD5A2P31213 254 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 IAH1Q2TAA2 248 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 RIPPLY2Q5TAB7 128 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 MYO7BQ6PIF6 2116 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 HAGHLQ6PII5 290 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 RAB11FIP2Q7L804 512 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 TMEM200AQ86VY9 491 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 OR5D18Q8NGL1 313 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 RBM24Q9BX46 236 aaKnown RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-207ENST00000433762 OCIAD1Q9NX40 245 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 ATPIF1Q9UII2 106 aa11.92□□□□□ -0.5
COL6A3-207ENST00000433762 OR6C6A6NF89 314 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 K7EPK0 472 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 GPR31O00270 319 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 PI3P19957 117 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
COL6A3-207ENST00000433762 MTCP1P56278 107 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 HMGN3Q15651 99 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 NRN1LQ496H8 165 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 OR51F2Q8NH61 342 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 OR1F12Q8NHA8 337 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF775Q96BV0 537 aaPredicted RBP11.91□□□□□ -0.5
COL6A3-207ENST00000433762 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 PRRX2Q99811 253 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 TMEM38BQ9NVV0 291 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 HPF1Q9NWY4 346 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
COL6A3-207ENST00000433762 A0A0J9YW62 118 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 CD5P06127 495 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 CHATP28329 748 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RBP2P50120 134 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 F2RL1P55085 397 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RSU1Q15404 277 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 PMS2CLQ68D20 193 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 BTNL8Q6UX41 500 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
COL6A3-207ENST00000433762 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 UBALD2Q8IYN6 164 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 AGBL5Q8NDL9 886 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 PIGTQ969N2 578 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 MICU1Q9BPX6 476 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 PILRBQ9UKJ0 227 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 ZNF175Q9Y473 711 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
COL6A3-207ENST00000433762 E5RGE8 158 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 NTN3O00634 580 aaPredicted RBP11.9□□□□□ -0.5
COL6A3-207ENST00000433762 KLF7O75840 302 aaPredicted RBP11.9□□□□□ -0.5
COL6A3-207ENST00000433762 HOXB5P09067 269 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 TMEM225BP0DP42 221 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 ICAM2P13598 275 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 DUSP3P51452 185 aaPredicted RBP11.9□□□□□ -0.5
COL6A3-207ENST00000433762 PCBD1P61457 104 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 GPR157Q5UAW9 335 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 NSG2Q9Y328 171 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 A0A0C4DFX4 3053 aa11.9□□□□□ -0.5
COL6A3-207ENST00000433762 PRSS44E7EML9 344 aa11.9□□□□□ -0.51
COL6A3-207ENST00000433762 FBXO24O75426 580 aa11.9□□□□□ -0.51
COL6A3-207ENST00000433762 B3GALT5-AS1P59052 145 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms