RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LYPD2Q6UXB3 125 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 LHFPL2Q6ZUX7 228 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 UTS2BQ765I0 119 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 KRT74Q7RTS7 529 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 PRSS48Q7RTY5 328 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 FAM90A1Q86YD7 464 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 OR5T2Q8NGG2 359 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 RFT1Q96AA3 541 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 TMEM186Q96B77 213 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 SSBP3Q9BWW4 388 aaPredicted RBP12.99□□□□□ -0.33
TREX1-201ENST00000433541 WDR13Q9H1Z4 485 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 DUSP21Q9H596 190 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 HIF1ANQ9NWT6 349 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 CKLFQ9UBR5 152 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 CLN8Q9UBY8 286 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 OR5V1Q9UGF6 321 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 LRCH1Q9Y2L9 728 aa12.99□□□□□ -0.33
TREX1-201ENST00000433541 TRAV20A0A0B4J274 112 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 NDUFA2O43678 99 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SULT1B1O43704 296 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SYNGR1O43759 233 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 RAB3AP20336 220 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 HNF1AP20823 631 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 GABRA2P47869 451 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 SMIM21Q3B7S5 101 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 YIF1BQ5BJH7 314 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 DCAF12L2Q5VW00 463 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 FAHD2BQ6P2I3 314 aaPredicted RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 ZNF485Q8NCK3 441 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 RGP1Q92546 391 aaPredicted RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 UFD1Q92890 307 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SLAMF9Q96A28 289 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SEH1LQ96EE3 360 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 FAHD2AQ96GK7 314 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 ZNF488Q96MN9 340 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 GPER1Q99527 375 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 TAS2R4Q9NYW5 299 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 NLKQ9UBE8 527 aa12.98□□□□□ -0.33
TREX1-201ENST00000433541 SONP18583 2426 aaKnown RBP12.98□□□□□ -0.33
TREX1-201ENST00000433541 LHBP01229 141 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 WNT2P09544 360 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 CFHR2P36980 270 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 MAP2K4P45985 399 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 DVL1P1P54792 670 aaPredicted RBP12.97□□□□□ -0.33
TREX1-201ENST00000433541 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 BDH1Q02338 343 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 Q499Y3 187 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 TEX36Q5VZQ5 186 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 CALHM1Q8IU99 346 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 MKXQ8IYA7 352 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 SVOPQ8N4V2 548 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 POC1AQ8NBT0 407 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 DNAAF1Q8NEP3 725 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 OR14A2Q96R54 314 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 CCL13Q99616 98 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 TMED9Q9BVK6 235 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 PKIBQ9C010 78 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 SHARPINQ9H0F6 387 aa12.97□□□□□ -0.33
TREX1-201ENST00000433541 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 A0A0G2JMP0 313 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 A0A0X1KG70 313 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 OR2AT4A6NND4 320 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 FSTL3O95633 263 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.33
TREX1-201ENST00000433541 IL24Q13007 206 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 IKZF1Q13422 519 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 IRF3Q14653 427 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 CR1LQ2VPA4 569 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 LIPKQ5VXJ0 399 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 IL17RELQ6ZVW7 336 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 OR4M2Q8NGB6 313 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 ST8SIA4Q92187 359 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 C12orf43Q96C57 262 aaKnown RBP12.96□□□□□ -0.33
TREX1-201ENST00000433541 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 BEX2Q9BXY8 128 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.33
TREX1-201ENST00000433541 RASL12Q9NYN1 266 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 OR14J1Q9UGF5 321 aa12.96□□□□□ -0.33
TREX1-201ENST00000433541 NSD1Q96L73 2696 aaPredicted RBP12.96□□□□□ -0.34
TREX1-201ENST00000433541 IGKV1-27A0A075B6S5 117 aa12.95□□□□□ -0.34
TREX1-201ENST00000433541 A0A1W2PPK0 400 aa12.95□□□□□ -0.34
TREX1-201ENST00000433541 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
TREX1-201ENST00000433541 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms