RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ITFG1Q8TB96 612 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 C16orf78Q8WTQ4 265 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 RORBQ92753 470 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 UBE2E3Q969T4 207 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 RERGQ96A58 199 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 TESCQ96BS2 214 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DYNLL2Q96FJ2 89 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CPNE2Q96FN4 548 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 MRPL48Q96GC5 212 aaKnown RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 ITCHQ96J02 903 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF641Q96N77 438 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 OXGR1Q96P68 337 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 PHB2Q99623 299 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF670Q9BS34 389 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 NIPSNAP3BQ9BS92 247 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CHIAQ9BZP6 476 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ACTR6Q9GZN1 396 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ARL6Q9H0F7 186 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CLMPQ9H6B4 373 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TMEM138Q9NPI0 162 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 SDHAF2Q9NX18 166 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TREM2Q9NZC2 230 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 VAPAQ9P0L0 249 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4Q9UBX2 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF391Q9UJN7 358 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DKKL1Q9UK85 242 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 VPREB3Q9UKI3 123 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ERBINQ96RT1 1412 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ERCC6Q03468 1493 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 SNAPC4Q5SXM2 1469 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CACNA1SQ13698 1873 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 MYH2Q9UKX2 1941 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 A0A0A6YYD5 115 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 A0A0B4J2E0 115 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KIR2DS1A0A191URI9 304 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TINCRA0A1B0GVN0 87 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 A0A1B0GX12 115 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 METTL15A6NJ78 407 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM166BA8MTA8 275 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 H3BMQ9 156 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 K7N7A8 449 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PLPP3O14495 311 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SLC31A1O15431 190 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 MPDU1O75352 247 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SERPINB7O75635 380 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KLF8O95600 359 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 RAB36O95755 333 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM228BP0C875 321 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 GTF2F2P13984 249 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CSNK2A2P19784 350 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 ATP6V1B2P21281 511 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PSMA1P25786 263 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 AQP1P29972 269 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FGF9P31371 208 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 LEPP41159 167 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KIR2DS4P43632 304 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 CCR6P51684 374 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 AQP5P55064 265 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 NAA20P61599 178 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SLC35B1P78383 322 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 NTHL1P78549 312 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TFAMQ00059 246 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 IL5RAQ01344 420 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 RAB40BQ12829 278 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 LAGE3Q14657 143 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 KIR2DS1Q14954 304 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 PTGES3Q15185 160 aaKnown RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR1Q1Q15612 314 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 NSDHLQ15738 373 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 MAPK14Q16539 360 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 POU2AF1Q16633 256 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 DUSP7Q16829 419 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 WHAMMP3Q1A5X7 153 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SPIN4Q56A73 249 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OGFRL1Q5TC84 451 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 TMEM42Q69YG0 159 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM199XQ6PEV8 388 aaPredicted RBP1.96□□□□□ -2.1
CLK1-204ENST00000432425 CD200R1LQ6Q8B3 271 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 Q6ZT83 130 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM220AQ7Z4H9 259 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 FAM19A1Q7Z5A9 133 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TMEM135Q86UB9 458 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 STX19Q8N4C7 294 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SMIM20Q8N5G0 67 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TPRX1Q8N7U7 411 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 HSD17B11Q8NBQ5 300 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ST6GALNAC3Q8NDV1 305 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TMEM161BQ8NDZ6 487 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 VN1R2Q8NFZ6 395 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 OR51A7Q8NH64 312 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 GPR151Q8TDV0 419 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 TMEM234Q8WY98 164 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 RAB8BQ92930 207 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 YIPF5Q969M3 257 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 SDSLQ96GA7 329 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 COL21A1Q96P44 957 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 QKIQ96PU8 341 aaKnown RBP eCLIP1.96□□□□□ -2.1
CLK1-204ENST00000432425 P2RX4Q99571 388 aa1.96□□□□□ -2.1
CLK1-204ENST00000432425 ARHGDIGQ99819 225 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms