RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 ZNF233A6NK53 670 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 F5H5K5 113 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 LINC01619G3V211 115 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 PHYHO14832 338 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 KMOO15229 486 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 ACOX3O15254 700 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 BIRC5O15392 142 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 GLSO94925 669 aaPredicted RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 HLA-DRAP01903 254 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 MRPL3P09001 348 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 CD3GP09693 182 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 SLC2A1P11166 492 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 RAB3AP20336 220 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 MSNP26038 577 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 BTCP35070 178 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 CEACAM6P40199 344 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 MYCNOSP40205 109 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 OMPP47874 163 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 TTPAP49638 278 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 P2RX1P51575 399 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 NUP107P57740 925 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 RAB14P61106 215 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 OR1Q1Q15612 314 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 ACSM3Q53FZ2 586 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 LRRC10Q5BKY1 277 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 LRRN1Q6UXK5 716 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 OR11H7Q8NGC8 314 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 OR5B17Q8NGF7 314 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 NTAN1Q96AB6 310 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 DCPSQ96C86 337 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 TAAR1Q96RJ0 339 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 PITX2Q99697 317 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 DHRS9Q9BPW9 319 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 SLIRPQ9GZT3 109 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 NANOGQ9H9S0 305 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 C12orf4Q9NQ89 552 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 FAM206AQ9NX38 181 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 NDRG2Q9UN36 371 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 TP53TG5Q9Y2B4 290 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 ZNF257Q9Y2Q1 563 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 UBIAD1Q9Y5Z9 338 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 V9GYQ6 96 aa3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 NUP153P49790 1475 aaKnown RBP3.67□□□□□ -1.82
CCDC88A-206ENST00000430086 ABCC11Q96J66 1382 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 IGLV1-36A0A0B4J1U3 117 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 A0A1W2PQL4 384 aaPredicted RBP3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 DAPL1A0PJW8 107 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 H7C417 338 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 STX10O60499 249 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 RAD1O60671 282 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 ENTPD6O75354 484 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 DCTN3O75935 186 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 SOX14O95416 240 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 PRB2P02812 416 aaPredicted RBP3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 CDK1P06493 297 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 ATF1P18846 271 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 RBMXP38159 391 aaKnown RBP3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 PSMB2P49721 201 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 ERFP50548 548 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 HHATQ5VTY9 493 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 FAM92BQ6ZTR7 304 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 WDFY1Q8IWB7 410 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 MKXQ8IYA7 352 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 BLIDQ8IZY5 108 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 ZFP82Q8N141 532 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 FAM71E2Q8N5Q1 922 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 OR4S2Q8NH73 311 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 ENKURQ8TC29 256 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 PHOSPHO2Q8TCD6 241 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 RXFP2Q8WXD0 754 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 C22orf15Q8WYQ4 148 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 TESCQ96BS2 214 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 SMIM12Q96EX1 92 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 TMEM208Q9BTX3 173 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 UGT2B28Q9BY64 529 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 IL37Q9NZH6 218 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 MTFP1Q9UDX5 166 aa3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 MRPS18BQ9Y676 258 aaKnown RBP3.66□□□□□ -1.82
CCDC88A-206ENST00000430086 CEMIPQ8WUJ3 1361 aa3.65□□□□□ -1.82
CCDC88A-206ENST00000430086 CIB4A0PJX0 185 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 SLC25A27O95847 323 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 RPSAP08865 295 aaKnown RBP3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 IGHV3-43DP0DP04 118 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 GGT2P36268 569 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 SERPINB9P50453 376 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 TIMM10P62072 90 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 CCL7P80098 99 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 LAMTOR4Q0VGL1 99 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 CDC20Q12834 499 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 EIF4EBP2Q13542 120 aaPredicted RBP3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 NSDHLQ15738 373 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 ZNF658BQ4V348 819 aaPredicted RBP3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 ACTBL2Q562R1 376 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 SPIN4Q56A73 249 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 TTC32Q5I0X7 151 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 CD200R1LQ6Q8B3 271 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 OR5M1Q8NGP8 315 aa3.65□□□□□ -1.83
CCDC88A-206ENST00000430086 OR6N1Q8NGY5 312 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms