RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MEMO1Q9Y316 297 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 H7C1Q1 480 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PHF1O43189 567 aaPredicted RBP10.95□□□□□ -0.66
CDH3-202ENST00000429102 RARRES2Q99969 163 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 SLC5A7Q9GZV3 580 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 ICE1Q9Y2F5 2266 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 LOC400499M0QZD8 3231 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 TMEM127O75204 238 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 CST7O76096 145 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 CD79AP11912 226 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 NDUFA6P56556 154 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 SPEM2Q0P670 501 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PHYHD1Q5SRE7 291 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 UQCC3Q6UW78 93 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PFDN5Q99471 154 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 GHRLQ9UBU3 117 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 WIF1Q9Y5W5 379 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 C7orf77A4D0Y5 90 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 SCRG1O75711 98 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 OR7C1O76099 320 aaPredicted RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 POU2F2P09086 479 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 DSPP15924 2871 aaKnown RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 APOBEC1P41238 236 aaKnown RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 CSNK1A1P48729 337 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 HOXA1P49639 335 aaPredicted RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 EIF5AL1Q6IS14 154 aaKnown RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 OR52M1Q8NGK5 317 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 PRRX2Q99811 253 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 ANKUB1A6NFN9 424 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 HSPB2A8KAH6 182 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 UMAD1C9J7I0 102 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 NPIPA2E9PIF3 369 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 NPIPA3F8WFD2 350 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 FGF16O43320 207 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 FPR2P25090 351 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 HSPB2Q16082 182 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 NOXO1Q8NFA2 376 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 PIGCQ92535 297 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 RAB18Q9NP72 206 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 A0A1B0GTQ1 180 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 CCL2P13500 99 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 EPHA1P21709 976 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 PPP1CCP36873 323 aaKnown RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 LTBRP36941 435 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 GUK1Q16774 197 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 THEM4Q5T1C6 240 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 SLC22A25Q6T423 547 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 FBXW12Q6X9E4 464 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 RTN4IP1Q8WWV3 396 aaPredicted RBP10.94□□□□□ -0.66
CDH3-202ENST00000429102 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 SMCO4Q9NRQ5 59 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 C1orf123Q9NWV4 160 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 P4HTMQ9NXG6 502 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 SRPK3Q9UPE1 567 aa10.94□□□□□ -0.66
CDH3-202ENST00000429102 LOC390937A0A1W2PQ73 354 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 A0A1W2PR80 420 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 FAM24AA6NFZ4 105 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 LMO7DNF2Z398 122 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 GEMIN2O14893 280 aaKnown RBP10.93□□□□□ -0.66
CDH3-202ENST00000429102 MELTFP08582 738 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
CDH3-202ENST00000429102 HABP2Q14520 560 aaPredicted RBP10.93□□□□□ -0.66
CDH3-202ENST00000429102 ZNF674Q2M3X9 581 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 PRR18Q8N4B5 295 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 ARRDC1Q8N5I2 433 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 LYZL4Q96KX0 146 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 CNTNAP3Q9BZ76 1288 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 LIME1Q9H400 295 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 KCNJ16Q9NPI9 418 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 ALKBH4Q9NXW9 302 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 PMS2P1A4D2B8 440 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 TRAPPC6AO75865 159 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 YIF1AO95070 293 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
CDH3-202ENST00000429102 PET100P0DJ07 73 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 DHRS7BQ6IAN0 325 aaPredicted RBP10.93□□□□□ -0.66
CDH3-202ENST00000429102 ANKRD37Q7Z713 158 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 ADAMTS17Q8TE56 1095 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 PIGQQ9BRB3 760 aa10.93□□□□□ -0.66
CDH3-202ENST00000429102 BLACEA4D250 179 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 MFNGO00587 321 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 POC1AQ8NBT0 407 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 RNASE11Q8TAA1 199 aaKnown RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 POC1BQ8TC44 478 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 COA4Q9NYJ1 87 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 KCNIP3Q9Y2W7 256 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 FER1L5A0AVI2 2057 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 DBX1A6NMT0 343 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 COLCA2A8K830 154 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 M0R135 149 aa10.92□□□□□ -0.66
CDH3-202ENST00000429102 TLX3O43711 291 aaPredicted RBP10.92□□□□□ -0.66
CDH3-202ENST00000429102 TRAF3IP2O43734 574 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms