RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZP2Q05996 745 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ACOT6Q3I5F7 207 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-206ENST00000428313 COL5A1-AS1Q5SY13 56 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 WBP2NLQ6ICG8 309 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF880Q6PDB4 577 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF66Q6ZN08 573 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 GBGT1Q8N5D6 347 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 OR2J1Q9GZK6 312 aa14.16□□□□□ -0.14
C9orf3-206ENST00000428313 SOCS1O15524 211 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 XRCC2O43543 280 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 FGF17O60258 216 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 PITX3O75364 302 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 GPR75O95800 540 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 PFN1P07737 140 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SELEP16581 610 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 PEBP1P30086 187 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SFTPDP35247 375 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 PSG6Q00889 435 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 OR5I1Q13606 314 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 NKAIN1Q4KMZ8 207 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 POMZP3Q6PJE2 187 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 ERN2Q76MJ5 926 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 AGBL5Q8NDL9 886 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 KCNG3Q8TAE7 436 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SCARF2Q96GP6 870 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 GSX1Q9H4S2 264 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 MSL2Q9HCI7 577 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 LYRM4Q9HD34 91 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 DNAH12Q6ZR08 3092 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 TRAV1-1A0A0B4J248 108 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SERINC4A6NH21 518 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 ZNF732B4DXR9 585 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 ST8SIA3O43173 380 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 LCATP04180 440 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SELPP16109 830 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 LBX1P52954 281 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SNU13P55769 128 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 FAM3BP58499 235 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 RANP62826 216 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 VAMP2P63027 116 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 CDK3Q00526 305 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 EWSR1Q01844 656 aaKnown RBP eCLIP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 ARFRP1Q13795 201 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 SSX7Q7RTT5 188 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 NUFIP2Q7Z417 695 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 MARCH3Q86UD3 253 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 RNASE8Q8TDE3 154 aaKnown RBP14.15□□□□□ -0.14
C9orf3-206ENST00000428313 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 HSF4Q9ULV5 492 aa14.15□□□□□ -0.14
C9orf3-206ENST00000428313 IGLV1-36A0A0B4J1U3 117 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 PQBP1O60828 265 aaKnown RBP14.14□□□□□ -0.15
C9orf3-206ENST00000428313 AHSA1O95433 338 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 UMODP07911 640 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 CTGFP29279 349 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 IDH3GP51553 393 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM50BP56557 158 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 KCNMB1Q16558 191 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 TCEAL8Q8IYN2 117 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 FBXL14Q8N1E6 418 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 LRTM2Q8N967 370 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 OR52R1Q8NGF1 315 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 OR1N1Q8NGS0 311 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 GNPNAT1Q96EK6 184 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-206ENST00000428313 BOD1Q96IK1 185 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 WFIKKN1Q96NZ8 548 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 S1PR5Q9H228 398 aa14.14□□□□□ -0.15
C9orf3-206ENST00000428313 CISD1Q9NZ45 108 aaKnown RBP14.14□□□□□ -0.15
C9orf3-206ENST00000428313 P2RY10O00398 339 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 FOXS1O43638 330 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 BGLAPP02818 100 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 PRNPP04156 253 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF10P21506 573 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-206ENST00000428313 BCKDHBP21953 392 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 DUSP1P28562 367 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 SELENOTP62341 195 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 SQSTM1Q13501 440 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 DEFB134Q4QY38 66 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 LEMD1Q68G75 181 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TBL1XR1Q9BZK7 514 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 DECR2Q9NUI1 292 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 PRSS37A4D1T9 235 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 A8MXE2 369 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 K7EP13 123 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 RRP8O43159 456 aaKnown RBP14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TNFSF13O75888 250 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 MPIG6BO95866 241 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 ZNF93P35789 620 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-206ENST00000428313 SLC37A1P57057 533 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 CHRFAM7AQ494W8 412 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM52BQ4KMG9 183 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 ACTL10Q5JWF8 245 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 OTPQ5XKR4 325 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 OR4N2Q8NGD1 307 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TSLPQ969D9 159 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 ARHGAP5-AS1Q96IT6 56 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 ST6GALNAC5Q9BVH7 336 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
C9orf3-206ENST00000428313 TSPAN2O60636 221 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 DIRAS3O95661 229 aa14.12□□□□□ -0.15
C9orf3-206ENST00000428313 TMEM225BP0DP42 221 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms