RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GALP22466 123 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 PXKQ7Z7A4 578 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 OR52H1Q8NGJ2 320 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 RNF141Q8WVD5 230 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 SNRNP40Q96DI7 357 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 RRNAD1Q96FB5 475 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF764Q96H86 408 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 GHITMQ9H3K2 345 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 DNAJB12Q9NXW2 375 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 OR6C6A6NF89 314 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 HS3ST1O14792 307 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 GPANK1O95872 356 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 IGF2P01344 180 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CD3DP04234 171 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 NMBP08949 121 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 NQO2P16083 231 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 HNF1AP20823 631 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CD80P33681 288 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 LIMK1P53667 647 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 PRSS12P56730 875 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 TNFAIP6P98066 277 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 HIKESHIQ53FT3 197 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 OR51E1Q8TCB6 317 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 RDH5Q92781 318 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 GMPPAQ96IJ6 420 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF552Q9H707 407 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 TAS2R5Q9NYW4 299 aa9.42□□□□□ -0.9
TCOF1-204ENST00000427724 CISD1Q9NZ45 108 aaKnown RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 UBE2J1Q9Y385 318 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-204ENST00000427724 VWA8A3KMH1 1905 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 J3QKU1 62 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 NDUFA6P56556 154 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 DMKNQ6E0U4 476 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 WDR88Q6ZMY6 472 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 OR5H14A6NHG9 310 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF705GA8MUZ8 300 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 PET100P0DJ07 73 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF136P52737 540 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 NKX6-1P78426 367 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 OR4C16Q8NGL9 310 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 OR2G2Q8NGZ5 317 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 PRRT1Q99946 306 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 POFUT1Q9H488 388 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 FLRT3Q9NZU0 649 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 CES1P1Q9UKY3 287 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 PTPRDP23468 1912 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 A0A0A6YYH2 397 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 LOC100289279A0A1B0GTE1 492 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 A6NJ64 397 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 RAB5CP51148 216 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF74Q16587 644 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 PLA2G2CQ5R387 149 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 FBXW9Q5XUX1 488 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF774Q6NX45 483 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 GLDNQ6ZMI3 551 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 HSD17B13Q7Z5P4 300 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 SFT2D1Q8WV19 159 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 APOBEC3DQ96AK3 386 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF391Q9UJN7 358 aa9.41□□□□□ -0.9
TCOF1-204ENST00000427724 NOTCH4Q99466 2003 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 C7orf66A4D0T2 115 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM235A6NFC5 223 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 RECKO95980 971 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 IFNA4P05014 189 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 BDKRB2P30411 391 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 SLC9A3R2Q15599 337 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 RFLNBQ8N5W9 214 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 SLCO1C1Q9NYB5 712 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-204ENST00000427724 FNDC1Q4ZHG4 1894 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-204ENST00000427724 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-204ENST00000427724 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 ARL6IP1Q15041 203 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 C2orf76Q3KRA6 126 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 C4orf17Q53FE4 359 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 PLXDC2Q6UX71 529 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 STPG2Q8N412 459 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 NOXO1Q8NFA2 376 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 OR13G1Q8NGZ3 307 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 MS4A5Q9H3V2 200 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 TAS2R4Q9NYW5 299 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 POLDIP2Q9Y2S7 368 aa9.4□□□□□ -0.9
TCOF1-204ENST00000427724 H7C1Q1 480 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 DEGS1O15121 323 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 MPGP29372 298 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 ERVK-16P61578 105 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 ELFN2Q5R3F8 820 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 FAHD2BQ6P2I3 314 aaPredicted RBP9.4□□□□□ -0.91
TCOF1-204ENST00000427724 SLC36A1Q7Z2H8 476 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 FAHD2AQ96GK7 314 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 MOGAT1Q96PD6 335 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 ONECUT1Q9UBC0 465 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 MIOXQ9UGB7 285 aa9.4□□□□□ -0.91
TCOF1-204ENST00000427724 OR5V1Q9UGF6 321 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms