RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 LHX4Q969G2 390 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 LGALS12Q96DT0 336 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 SDSLQ96GA7 329 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 DMRTB1Q96MA1 342 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 ZNF649Q9BS31 505 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 FAM118AQ9NWS6 357 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 FRRS1LQ9P0K9 344 aa15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 SLC25A10Q9UBX3 287 aaPredicted RBP15.09■□□□□ 0.01
SMARCAL1-205ENST00000425815 IGKV1-27A0A075B6S5 117 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 IGHV1-69DA0A0B4J2H0 117 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 A0A1B0GVI7 797 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 RFPL4AA6NLU0 287 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 RFPL4AL1F8VTS6 287 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 J3QT63 122 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 IGHV1-69P01742 117 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 RNASE1P07998 156 aaKnown RBP15.08■□□□□ 0
SMARCAL1-205ENST00000425815 HKR1P10072 659 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 MPZP25189 248 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 DLX1P56177 255 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 CAV3P56539 151 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 NANOS3P60323 173 aaKnown RBP15.08■□□□□ 0
SMARCAL1-205ENST00000425815 IL13RA1P78552 427 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 PRB3Q04118 309 aaPredicted RBP15.08■□□□□ 0
SMARCAL1-205ENST00000425815 PDCD1Q15116 288 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 FDX2Q6P4F2 183 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 Q6YL49 198 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 VMO1Q7Z5L0 202 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 OR2G2Q8NGZ5 317 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 NRIP2Q9BQI9 281 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 ELL3Q9HB65 397 aaPredicted RBP15.08■□□□□ 0
SMARCAL1-205ENST00000425815 HES4Q9HCC6 221 aa15.08■□□□□ 0
SMARCAL1-205ENST00000425815 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.08■□□□□ 0
SMARCAL1-205ENST00000425815 DOCK11Q5JSL3 2073 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 LOC100130705A0A1B0GUX0 176 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 DAPL1A0PJW8 107 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 ANKRD61A6NGH8 418 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 NKX6-3A6NJ46 265 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 SLC16A6O15403 523 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 HOXA3O43365 443 aaPredicted RBP15.07■□□□□ 0
SMARCAL1-205ENST00000425815 ERVK11-1P61568 191 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 AWAT1Q58HT5 328 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 KCTD20Q7Z5Y7 419 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 PDZD9Q8IXQ8 264 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 BATF2Q8N1L9 274 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 TRMT10AQ8TBZ6 339 aaKnown RBP15.07■□□□□ 0
SMARCAL1-205ENST00000425815 GATAD2BQ8WXI9 593 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 TNFRSF14Q92956 283 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 AMBNQ9NP70 447 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 ONECUT1Q9UBC0 465 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 MYRFQ9Y2G1 1151 aa15.07■□□□□ 0
SMARCAL1-205ENST00000425815 LOC107986453A0A1B0GWG9 222 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 BAG2O95816 211 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 NDUFB7P17568 137 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 PRDX2P32119 198 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 ZNF91Q05481 1191 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 ACBD7Q8N6N7 88 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 KIR3DL3Q8N743 410 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 CCDC54Q8NEL0 328 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 APH1BQ8WW43 257 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 H1FXQ92522 213 aaKnown RBP15.06■□□□□ 0
SMARCAL1-205ENST00000425815 ADAT3Q96EY9 351 aaPredicted RBP15.06■□□□□ 0
SMARCAL1-205ENST00000425815 PELI1Q96FA3 418 aa15.06■□□□□ 0
SMARCAL1-205ENST00000425815 ZMAT3Q9HA38 289 aaKnown RBP15.06■□□□□ 0
SMARCAL1-205ENST00000425815 IGKV1-9A0A0C4DH69 117 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 FAM230AA0A1W2PPH8 454 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 F8VVB4 439 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 F8VWA3 439 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ISG15P05161 165 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 DBTP11182 482 aaKnown RBP15.05■□□□□ -0
SMARCAL1-205ENST00000425815 CEBPDP49716 269 aaPredicted RBP15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ACTC1P68032 377 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ACTA1P68133 377 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 C16orf87Q6PH81 154 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 FAM220AQ7Z4H9 259 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 LHFPL3Q86UP9 236 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ZDHHC16Q969W1 377 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 SLC25A28Q96A46 364 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ADI1Q9BV57 179 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 PKIBQ9C010 78 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 CHST5Q9GZS9 411 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 ISG20L2Q9H9L3 353 aaKnown RBP15.05■□□□□ -0
SMARCAL1-205ENST00000425815 NOX4Q9NPH5 578 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 SIRT7Q9NRC8 400 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 MRPS18AQ9NVS2 196 aaKnown RBP15.05■□□□□ -0
SMARCAL1-205ENST00000425815 MTCH1Q9NZJ7 389 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 PCDHGB1Q9Y5G3 927 aa15.05■□□□□ -0
SMARCAL1-205ENST00000425815 A0A0U1RQK1 487 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 RNASEK-C17orf49H0YIS7 233 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 J3QLW9 94 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 MELTFP08582 738 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 UBCP0CG48 685 aaKnown RBP15.04■□□□□ -0
SMARCAL1-205ENST00000425815 ZNF19P17023 458 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 CCR9P51686 369 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 FUT6P51993 359 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 IL24Q13007 206 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 GALEQ14376 348 aa15.04■□□□□ -0
SMARCAL1-205ENST00000425815 TMEM244Q5VVB8 128 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms