RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MBD2Q9UBB5 411 aa10.06□□□□□ -0.8
UBR4-207ENST00000425413 KCNMB2Q9Y691 235 aa10.06□□□□□ -0.8
UBR4-207ENST00000425413 DHRS7CA6NNS2 312 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 NRASP01111 189 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 PRKACBP22694 351 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 CPT2P23786 658 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 GSK3AP49840 483 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 LUMP51884 338 aaPredicted RBP10.05□□□□□ -0.8
UBR4-207ENST00000425413 IKZF1Q13422 519 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 TMEM230Q96A57 120 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 DDA1Q9BW61 102 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 ZNF471Q9BX82 626 aaPredicted RBP10.05□□□□□ -0.8
UBR4-207ENST00000425413 REG4Q9BYZ8 158 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 PPA2Q9H2U2 334 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 CD79AP11912 226 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 CLEC18BQ6UXF7 455 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 UNQ6126/PRO20091Q6UXV3 157 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 TMPRSS7Q7RTY8 843 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 PDZD9Q8IXQ8 264 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 FAM89BQ8N5H3 189 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 DEFB127Q9H1M4 99 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 C12orf49Q9H741 205 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 ZNF629Q9UEG4 869 aaPredicted RBP10.05□□□□□ -0.8
UBR4-207ENST00000425413 SVILO95425 2214 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 OR6C6A6NF89 314 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 GEMIN2O14893 280 aaKnown RBP10.05□□□□□ -0.8
UBR4-207ENST00000425413 DNPH1O43598 174 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 CYTIPO60759 359 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 B3GALNT1O75752 331 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 FARS2O95363 451 aaKnown RBP10.05□□□□□ -0.8
UBR4-207ENST00000425413 HOXB5P09067 269 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 ZNF883P0CG24 379 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 LHX2P50458 406 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 C11orf87Q6NUJ2 197 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 FBXL14Q8N1E6 418 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 CDC6Q99741 560 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 METTL9Q9H1A3 318 aa10.05□□□□□ -0.8
UBR4-207ENST00000425413 RP1L1Q8IWN7 2480 aaPredicted RBP10.04□□□□□ -0.8
UBR4-207ENST00000425413 IGKV1-12A0A0C4DH73 117 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
UBR4-207ENST00000425413 IGKV1D-12P01611 117 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 SFTPBP07988 381 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 EDN3P14138 238 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 RPA2P15927 270 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 RBP2P50120 134 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 STPG2Q8N412 459 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 TOMM40LQ969M1 308 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 WBP1Q96G27 269 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 MYOZ1Q9NP98 299 aaPredicted RBP10.04□□□□□ -0.8
UBR4-207ENST00000425413 B4GALT7Q9UBV7 327 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 GPR132Q9UNW8 380 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 LAMA5O15230 3695 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 C5orf49A4QMS7 147 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ZNF503-AS2A6NEH8 195 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ARGFXA6NJG6 315 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ZNF850A8MQ14 1090 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 IL2RAP01589 272 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 MPGP29372 298 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ARHGDIBP52566 201 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 FAM3AP98173 230 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 PNLIPRP3Q17RR3 467 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ANKRD55Q3KP44 614 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 TMEM128Q5BJH2 165 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 AADACL3Q5VUY0 350 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 ELP2Q6IA86 826 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
UBR4-207ENST00000425413 METTL8Q9H825 291 aaKnown RBP10.04□□□□□ -0.8
UBR4-207ENST00000425413 CRIM1Q9NZV1 1036 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 GPR160Q9UJ42 338 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 CSAG2Q9Y5P2 127 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 LIPGQ9Y5X9 500 aa10.04□□□□□ -0.8
UBR4-207ENST00000425413 KANTRA0A1W2PQU2 76 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 MSTNO14793 375 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 SYNGR4O95473 234 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 TBPP20226 339 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 CLDN18P56856 261 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 FXYD4P59646 89 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 PDSS1Q5T2R2 415 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 C5orf24Q7Z6I8 188 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ARRDC1Q8N5I2 433 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 SPERTQ8NA61 448 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 Q96M66 194 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 SULT4A1Q9BR01 284 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ZNF2Q9BSG1 426 aaPredicted RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 ABI3Q9P2A4 366 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 AK3Q9UIJ7 227 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms