RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 HS3ST5Q8IZT8 346 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 CYB561A3Q8NBI2 242 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SDR9C7Q8NEX9 313 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PROKR2Q8NFJ6 384 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 OR1F12Q8NHA8 337 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PTP4A1Q93096 173 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 MRPL24Q96A35 216 aaKnown RBP2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PLEKHA8Q96JA3 519 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 C4orf45Q96LM5 186 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 COQ7Q99807 217 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 CACNG6Q9BXT2 260 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PRRG3Q9BZD7 231 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 HDHD2Q9H0R4 259 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 RAB1BQ9H0U4 201 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 MARCH7Q9H992 704 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 S100A14Q9HCY8 104 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SLCO1C1Q9NYB5 712 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PLEK2Q9NYT0 353 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 POLR1DQ9Y2S0 133 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 PRR14LQ5THK1 2151 aa2.09□□□□□ -2.07
VPS13A-208ENST00000423463 SPG11Q96JI7 2443 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 IGLV3-9A0A075B6K5 115 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 C5orf49A4QMS7 147 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 OR6C6A6NF89 314 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF593O00488 134 aaPredicted RBP2.09□□□□□ -2.08
VPS13A-208ENST00000423463 RER1O15258 196 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SURF4O15260 269 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SSX4O60224 188 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 GLCEO94923 617 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 IGHV3-13P01766 116 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CSF3P09919 207 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 FAM106CPP0CH98 169 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CCL2P13500 99 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CD99P14209 185 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF250P15622 560 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SPI1P17947 270 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CCNOP22674 350 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 PYCR1P32322 319 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 GGT2P36268 569 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CDKN1AP38936 164 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 HTR5AP47898 357 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 PPOXP50336 477 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CD81P60033 236 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 PPP1CBP62140 327 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SLC35D3Q5M8T2 416 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 ELFN2Q5R3F8 820 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 LINC01590Q5TEZ4 76 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SLX4IPQ5VYV7 408 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 OR5L1Q8NGL2 311 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 OR9Q1Q8NGQ5 310 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 OR1J1Q8NGS3 322 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SYNPRQ8TBG9 265 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 PYDC1Q8WXC3 89 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 APOBEC3DQ96AK3 386 aaPredicted RBP2.09□□□□□ -2.08
VPS13A-208ENST00000423463 HAVCR1Q96D42 359 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 FOXN4Q96NZ1 517 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 MS4A10Q96PG2 267 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 PKP2Q99959 881 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 RBM4BQ9BQ04 359 aaKnown RBP2.09□□□□□ -2.08
VPS13A-208ENST00000423463 SEMA6AQ9H2E6 1030 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 DYNLRB1Q9NP97 96 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 MYOZ1Q9NP98 299 aaPredicted RBP2.09□□□□□ -2.08
VPS13A-208ENST00000423463 MRPL22Q9NWU5 206 aaKnown RBP2.09□□□□□ -2.08
VPS13A-208ENST00000423463 TVP23BQ9NYZ1 205 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 USE1Q9NZ43 259 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CYB5R1Q9UHQ9 305 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 GRIP1Q9Y3R0 1128 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 LHFPL6Q9Y693 200 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CADP27708 2225 aa2.09□□□□□ -2.08
VPS13A-208ENST00000423463 CREBBPQ92793 2442 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TVP23AA6NH52 213 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 M0R233 179 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 GPRIN2O60269 458 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NGFP01138 241 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 IGHV4-39P01824 125 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 APOC1P02654 83 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ADRA2AP08913 450 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KITLGP21583 273 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 IGFBP5P24593 272 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 WNT5AP41221 380 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KLF3P57682 345 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TMED1Q13445 227 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TAF13Q15543 124 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZSCAN26Q16670 478 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 MEP1BQ16820 701 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CLEC12BQ2HXU8 276 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 RSPO1Q2MKA7 263 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KRTAP27-1Q3LI81 207 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KRBOX4Q5JUW0 171 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 LCN1P1Q5VSP4 162 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM236Q5W0B7 351 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 C12orf73Q69YU5 71 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 PLBD1Q6P4A8 553 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DNM1P46Q6ZS02 220 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZBTB49Q6ZSB9 765 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 GBGT1Q8N5D6 347 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ICA1LQ8NDH6 482 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 WFDC11Q8NEX6 87 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DMBX1Q8NFW5 382 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR51L1Q8NGJ5 315 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms