RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MAGEB3O15480 346 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 LHBP01229 141 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 MAS1P04201 325 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 EGR1P18146 543 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 ADRA2CP18825 462 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 SRMP19623 302 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 CALRP27797 417 aaKnown RBP14.28□□□□□ -0.12
COL7A1-202ENST00000422991 FGF9P31371 208 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-202ENST00000422991 GPR6P46095 362 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-202ENST00000422991 HOXA4Q00056 320 aaPredicted RBP14.28□□□□□ -0.12
COL7A1-202ENST00000422991 IL24Q13007 206 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 C22orf42Q6IC83 251 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 MED13LQ71F56 2210 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 LRRTM1Q86UE6 522 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 TMIGD2Q96BF3 282 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 TIMD4Q96H15 378 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 Q96MF0 132 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 BPESC1Q9GZL8 116 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 TCF7L1Q9HCS4 588 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 TXNL4BQ9NX01 149 aaKnown RBP14.28□□□□□ -0.12
COL7A1-202ENST00000422991 SSR3Q9UNL2 185 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 POLDIP2Q9Y2S7 368 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 WIPI2Q9Y4P8 454 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 NPTNQ9Y639 398 aa14.28□□□□□ -0.12
COL7A1-202ENST00000422991 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.27□□□□□ -0.13
COL7A1-202ENST00000422991 PLATP00750 562 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 IGHV2-70P01814 119 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 PGA5P0DJD9 388 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 SLC25A16P16260 332 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 CD80P33681 288 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 NR4A2P43354 598 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 POU3F4P49335 361 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 ZP1P60852 638 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 BTG1P62324 171 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 PDZK1IP1Q13113 114 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 ZMYND11Q15326 602 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 FAM201AQ5SY85 155 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 AVPI1Q5T686 147 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 SLC25A26Q70HW3 274 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 PEG10Q86TG7 708 aaKnown RBP14.27□□□□□ -0.13
COL7A1-202ENST00000422991 NKAIN3Q8N8D7 197 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 POC1AQ8NBT0 407 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 OR5D18Q8NGL1 313 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF671Q8TAW3 534 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 RAB1CQ92928 201 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 CHCHD6Q9BRQ6 235 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 SLITRK2Q9H156 845 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 EXOSC4Q9NPD3 245 aaKnown RBP14.27□□□□□ -0.13
COL7A1-202ENST00000422991 SNTG1Q9NSN8 517 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 SCOCQ9UIL1 159 aa14.27□□□□□ -0.13
COL7A1-202ENST00000422991 ZANQ9Y493 2812 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 MEGF11A6BM72 1044 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 AKR7A2O43488 359 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 SPRY1O43609 319 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 NOS1APO75052 506 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 FSTL3O95633 263 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 ACAA1P09110 424 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF93P35789 620 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 TIMM50Q3ZCQ8 353 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 SATL1Q86VE3 508 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 LYPD6Q86Y78 171 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 CDH26Q8IXH8 852 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 BOLLQ8N9W6 283 aaKnown RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 SLAMF9Q96A28 289 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF488Q96MN9 340 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 GPER1Q99527 375 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 NKX3-1Q99801 234 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-202ENST00000422991 NRIP2Q9BQI9 281 aa14.26□□□□□ -0.13
COL7A1-202ENST00000422991 PPIAL4EA0A075B759 164 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 A0A096LNT2 108 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 TRAV1-2A0A0B4J238 106 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 LOC100506127A0A0U1RQW1 187 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 SHISA3A0PJX4 238 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 PPIAL4DF5H284 164 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 C3orf80F5H4A9 247 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 WNT9BO14905 357 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 ZNF205O95201 554 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 PPIAL4FP0DN26 164 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 MYL9P24844 172 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 MDH2P40926 338 aaKnown RBP14.25□□□□□ -0.13
COL7A1-202ENST00000422991 OR3A4PP47883 348 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 ERVK11-1P61568 191 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 GDPGP1Q6ZNW5 385 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 MKXQ8IYA7 352 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-202ENST00000422991 GFI1Q99684 422 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 FUNDC2Q9BWH2 189 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 WDR13Q9H1Z4 485 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 MTCH1Q9NZJ7 389 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 GSTK1Q9Y2Q3 226 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 PPIAL4AQ9Y536 164 aa14.25□□□□□ -0.13
COL7A1-202ENST00000422991 CR1P17927 2039 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 IGKV1-12A0A0C4DH73 117 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 ISPDA4D126 451 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 OOEPA6NGQ2 149 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 LGALS8O00214 317 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 ANGPTL7O43827 346 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 AIREO43918 545 aa14.24□□□□□ -0.13
COL7A1-202ENST00000422991 CYB5AP00167 134 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms