RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
TMEM53-206ENST00000420706 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
TMEM53-206ENST00000420706 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 A6NLC8 198 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 J3QT63 122 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 ANGPTL7O43827 346 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 ACAA1P09110 424 aaPredicted RBP10.54□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF182P17025 639 aaPredicted RBP10.54□□□□□ -0.72
TMEM53-206ENST00000420706 COL8A2P25067 703 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 RBMXP38159 391 aaKnown RBP10.54□□□□□ -0.72
TMEM53-206ENST00000420706 CLDN12P56749 244 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 RAB11BQ15907 218 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 WDR82Q6UXN9 313 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 OR51D1Q8NGF3 324 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 Q8TCH9 128 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 TREM2Q9NZC2 230 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 MTCH1Q9NZJ7 389 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 DAPK2Q9UIK4 370 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 PPP1R3CQ9UQK1 317 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 MRPS28Q9Y2Q9 187 aaKnown RBP10.54□□□□□ -0.72
TMEM53-206ENST00000420706 DYSFO75923 2080 aa10.54□□□□□ -0.72
TMEM53-206ENST00000420706 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
TMEM53-206ENST00000420706 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 A0A0B4J203 849 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CDC14BO60729 498 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
TMEM53-206ENST00000420706 TMEM127O75204 238 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 NDUFS7O75251 213 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 KDM4BO94953 1096 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CYB5AP00167 134 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 F12P00748 615 aaPredicted RBP10.53□□□□□ -0.72
TMEM53-206ENST00000420706 LHBP01229 141 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CFHR2P36980 270 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 RANBP1P43487 201 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 EFNA4P52798 201 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 P2RY14Q15391 338 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF181Q2M3W8 571 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CNPY1Q3B7I2 92 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 AWAT2Q6E213 333 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 TGIF2LYQ8IUE0 185 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 TBC1D15Q8TC07 691 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 LRRC29Q8WV35 223 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 SLAMF9Q96A28 289 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 FAM3DQ96BQ1 224 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 C1orf147Q96MC9 270 aaPredicted RBP10.53□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF488Q96MN9 340 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 S100A13Q99584 98 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 DCUN1D5Q9BTE7 237 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 METTL9Q9H1A3 318 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 ZNF701Q9NV72 531 aaPredicted RBP10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
TMEM53-206ENST00000420706 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 RNF7Q9UBF6 113 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 GHRLQ9UBU3 117 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 POLDIP2Q9Y2S7 368 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 CACNG2Q9Y698 323 aa10.53□□□□□ -0.72
TMEM53-206ENST00000420706 IGHV1-69-2A0A0G2JMI3 117 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 hCG_1807616A0A1W2PRN6 198 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 F8VVB4 439 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 F8VWA3 439 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 TRAPPC2LH3BP13 241 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 AKR7A2O43488 359 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 BPNT1O95861 308 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 SFTPBP07988 381 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 UBBP0CG47 229 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 PGA5P0DJD9 388 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 VSIG8P0DPA2 414 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 CALCBP10092 127 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.73
TMEM53-206ENST00000420706 ARSBP15848 533 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 PAX1P15863 534 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 BCL3P20749 454 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 SOX6P35712 828 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 NPBWR2P48146 333 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 ERVK11-1P61568 191 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 MRPS11P82912 194 aaKnown RBP10.52□□□□□ -0.73
TMEM53-206ENST00000420706 QRFPP83859 136 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 RSU1Q15404 277 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 DGUOKQ16854 277 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 GCSAMQ8N6F7 178 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 POC1AQ8NBT0 407 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 Q8NFD4 153 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 OR11L1Q8NGX0 322 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 OR10K1Q8NGX5 313 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 CCL17Q92583 94 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 RDH5Q92781 318 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.73
TMEM53-206ENST00000420706 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
TMEM53-206ENST00000420706 LIN7BQ9HAP6 207 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 ELL3Q9HB65 397 aaPredicted RBP10.52□□□□□ -0.73
TMEM53-206ENST00000420706 SMURF1Q9HCE7 757 aa10.52□□□□□ -0.73
TMEM53-206ENST00000420706 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms