RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ZNF679Q8IYX0 411 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 SPERTQ8NA61 448 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 ASB17Q8WXJ9 295 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FAHD2AQ96GK7 314 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 LYZL4Q96KX0 146 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM246Q9BRR3 403 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 MROQ9BYG7 248 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 TTTY10Q9BZA0 68 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PPP1R3EQ9H7J1 279 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FN3KRPQ9HA64 309 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM165Q9HC07 324 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 UFSP2Q9NUQ7 469 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 C1orf123Q9NWV4 160 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 FAM206AQ9NX38 181 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 HAO2Q9NYQ3 351 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 USE1Q9NZ43 259 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 IKZF2Q9UKS7 526 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 PPIAL4AQ9Y536 164 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM14AQ9Y6G1 99 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 ARHGAP32A7KAX9 2087 aa5.77□□□□□ -1.49
HMGN1-205ENST00000419378 LOC105371242A0A075B767 164 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 PPIAL4CA0A0B4J2A2 164 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 TMEM269A0A1B0GVZ9 245 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 HMX3A6NHT5 357 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 A6NLC8 198 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 LINC00473A8K010 186 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 PHYHO14832 338 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF254O75437 659 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 WNT2P09544 360 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ACKR3P25106 362 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 HTR1FP30939 366 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 DCTDP32321 178 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CD80P33681 288 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ALDH3A2P51648 485 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CXCR4P61073 352 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CSNK2BP67870 215 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MFGE8Q08431 387 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MZT1Q08AG7 82 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 SNCBQ16143 134 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF829Q3KNS6 432 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ESCO2Q56NI9 601 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ATPAF1Q5TC12 328 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CRIP3Q6Q6R5 217 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF322Q6U7Q0 402 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 DCDC5Q6ZRR9 648 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF826PQ6ZT77 177 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 SLC35F2Q8IXU6 374 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 FTMTQ8N4E7 242 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CBR4Q8N4T8 237 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 BOLLQ8N9W6 283 aaKnown RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 C19orf18Q8NEA5 215 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 DEFB108BQ8NET1 73 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CSNK2A3Q8NEV1 391 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 OR51G2Q8NGK0 314 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 OR8J1Q8NGP2 316 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 OR8S1Q8NH09 359 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 FAM81AQ8TBF8 368 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 RAB3IPQ96QF0 476 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 TBX5Q99593 518 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 PAPOLGQ9BWT3 736 aaKnown RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 PBOV1Q9GZY1 135 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 METTL17Q9H7H0 456 aaPredicted RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MOB1AQ9H8S9 216 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 S100A14Q9HCY8 104 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MMP26Q9NRE1 261 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 SERTAD4Q9NUC0 356 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 CLN6Q9NWW5 311 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 RNF7Q9UBF6 113 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MIOXQ9UGB7 285 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 OR5V1Q9UGF6 321 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 WARS2Q9UGM6 360 aaKnown RBP5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF391Q9UJN7 358 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 MYRFQ9Y2G1 1151 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 RHBDD3Q9Y3P4 386 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 ORC6Q9Y5N6 252 aa5.76□□□□□ -1.49
HMGN1-205ENST00000419378 A0A0U1RQV5 110 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 hCG_1807616A0A1W2PRN6 198 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 OOEPA6NGQ2 149 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ACOD1A6NK06 481 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ANXA2P2A6NMY6 339 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF850A8MQ14 1090 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 RNF212BA8MTL3 300 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF670-ZNF695F2Z2N8 137 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 TRAPPC2LH3BP13 241 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 LGALS8O00214 317 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 MAGEB4O15481 346 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 SRSF10O75494 262 aaKnown RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 CST4P01036 141 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 FSHBP01225 129 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 IGLV3-1P01715 115 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF12P17014 697 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 NDUFB7P17568 137 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ADRA2CP18825 462 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 CPT2P23786 658 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 PITPNBP48739 271 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 RIDAP52758 137 aaKnown RBP5.75□□□□□ -1.49
HMGN1-205ENST00000419378 CDC42P60953 191 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 GNB2P62879 340 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 IL5RAQ01344 420 aa5.75□□□□□ -1.49
HMGN1-205ENST00000419378 ZNF154Q13106 437 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms