RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TMEM200AQ86VY9 491 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OSR2Q8N2R0 312 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR6K3Q8NGY3 331 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 REPIN1Q9BWE0 567 aaKnown RBP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 HES7Q9BYE0 225 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 NMES1Q9C002 83 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 WDFY3Q8IZQ1 3526 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR5H14A6NHG9 310 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARPC5O15511 151 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CSN2P05814 226 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SDHBP21912 280 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PDZK1IP1Q13113 114 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CAMK2BQ13554 666 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PLCXD3Q63HM9 321 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C1QL2Q7Z5L3 287 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR8H3Q8N146 312 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GMPPAQ96IJ6 420 aaPredicted RBP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 LDAHQ9H6V9 325 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CALHM2Q9HA72 323 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PLA2G3Q9NZ20 509 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OSGIN2Q9Y236 505 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARHGAP21Q5T5U3 1957 aa12.62□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CACNA1HO95180 2353 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF318Q5VUA4 2279 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SLC22A20A6NK97 555 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RAD51DO75771 328 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MPC2O95563 127 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 IGHG3P01860 377 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PMP2P02689 132 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PET100P0DJ07 73 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EDN3P14138 238 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CXCL2P19875 107 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TNFSF10P50591 281 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TGFBR3Q03167 851 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DCAF12L2Q5VW00 463 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ELP2Q6IA86 826 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RPUSD3Q6P087 351 aaKnown RBP12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MRPL21Q7Z2W9 205 aaKnown RBP12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PLK3Q9H4B4 646 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EHFQ9NZC4 300 aa12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C14orf166Q9Y224 244 aaKnown RBP12.61□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARGFXA6NJG6 315 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 POM121CA8CG34 1229 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 HTR3BO95264 441 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SFT2D2O95562 160 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 VAMP1P23763 118 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CHATP28329 748 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SSTR2P30874 369 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARPC4P59998 168 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CLN3Q13286 438 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 FBXW9Q5XUX1 488 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C11orf87Q6NUJ2 197 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GSG1LQ6UXU4 331 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TMUB2Q71RG4 321 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RNF144BQ7Z419 303 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ANGPTL6Q8NI99 470 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SCARB1Q8WTV0 552 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PRRX2Q99811 253 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 NECAP2Q9NVZ3 263 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ANXA10Q9UJ72 324 aa12.6□□□□□ -0.39
HLA-DPA1-242ENST00000419277 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 APLNRP35414 380 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RFC3P40938 356 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C6orf183Q5T699 404 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 Q6ZS49 121 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 NUFIP2Q7Z417 695 aaKnown RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZDHHC23Q8IYP9 409 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 IRF2BPLQ9H1B7 796 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C5orf66Q9H5L9 145 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF552Q9H707 407 aaPredicted RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MPC1Q9Y5U8 109 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms