RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 LYPD6Q86Y78 171 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF573Q86YE8 665 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 MKXQ8IYA7 352 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 Q8IYB0 196 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 SAXO1Q8IYX7 474 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF808Q8N4W9 903 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 SPERTQ8NA61 448 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 NUP37Q8NFH4 326 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 PXT1Q8NFP0 134 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 OR5A2Q8NGI9 324 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 KLF14Q8TD94 323 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CHPT1Q8WUD6 406 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CMBLQ96DG6 245 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 MARS2Q96GW9 593 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ZC3HAV1LQ96H79 300 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 COX4I2Q96KJ9 171 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 GAL3ST1Q99999 423 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 C7orf50Q9BRJ6 194 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 PKIBQ9C010 78 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 SCPEP1Q9HB40 452 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 KCNJ16Q9NPI9 418 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 IFT46Q9NQC8 304 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 NDRG3Q9UGV2 375 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ERRFI1Q9UJM3 462 aaPredicted RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 ING4Q9UNL4 249 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 CACNA1DQ01668 2161 aa5.11□□□□□ -1.59
HMGB3-202ENST00000419110 SPTBN1Q01082 2364 aaKnown RBP5.11□□□□□ -1.59
HMGB3-202ENST00000419110 IGSF10Q6WRI0 2623 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 IGKV1-27A0A075B6S5 117 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TRAV18A0A075B6X5 111 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 NKX2-6A6NCS4 301 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM235A6NFC5 223 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 A6NLC8 198 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF732B4DXR9 585 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TRAPPC2LH3BP13 241 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 H3BUI4 141 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SULT1C2O00338 296 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 ABCD4O14678 606 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SPRY1O43609 319 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 HTR3BO95264 441 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CD3EP07766 207 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CHRM2P08172 466 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 GSTP1P09211 210 aaKnown RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CSF1P09603 554 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 GSTT2BP0CG30 244 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 NAT2P11245 290 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 GTF2F2P13984 249 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CA6P23280 308 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TNFSF4P23510 183 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 PRSS3P35030 304 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 RCVRNP35243 200 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 MPV17P39210 176 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 GDNFP39905 211 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 HAAOP46952 286 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 VEGFCP49767 419 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 MMP15P51511 669 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 RBM11P57052 281 aaKnown RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 NKX6-1P78426 367 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 MRPS15P82914 257 aaKnown RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 BSPH1Q075Z2 132 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 PSG7Q13046 419 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 PDZK1IP1Q13113 114 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 NKPD1Q17RQ9 610 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 ARSJQ5FYB0 599 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 BEX5Q5H9J7 111 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 XP32Q5T750 250 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR10K2Q6IF99 312 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 ADAM5Q6NVV9 412 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 HAGHLQ6PII5 290 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 VHLLQ6RSH7 139 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SLC22A25Q6T423 547 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 Q6ZTK2 550 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SLC25A26Q70HW3 274 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 KRT74Q7RTS7 529 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 LINC00596Q86U02 117 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TOMM5Q8N4H5 51 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CHST4Q8NCG5 386 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR8G5Q8NG78 346 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR10AD1Q8NGE0 317 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR51T1Q8NGJ9 327 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR13G1Q8NGZ3 307 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 FCAMRQ8WWV6 532 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 DEDD2Q8WXF8 326 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 OR5P3Q8WZ94 311 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 EMG1Q92979 244 aaKnown RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 YIPF5Q969M3 257 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 RAB3CQ96E17 227 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 MRPS24Q96EL2 167 aaKnown RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 RNF170Q96K19 258 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 Q96M66 194 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 C1orf147Q96MC9 270 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SDHCQ99643 169 aaPredicted RBP5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TM2D1Q9BX74 207 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 SELENOIQ9C0D9 397 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 LPAR5Q9H1C0 372 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 CXXC4Q9H2H0 198 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 PLK3Q9H4B4 646 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 BANF2Q9H503 90 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 PPP1R3EQ9H7J1 279 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms