RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EPHA1P21709 976 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 PAX5Q02548 391 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 PNRC1Q12796 327 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM189A2Q15884 450 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 DEGS2Q6QHC5 323 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC25A26Q70HW3 274 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 ZFP62Q8NB50 900 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 OR10G4Q8NGN3 311 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC22A18Q96BI1 424 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 BANF2Q9H503 90 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 PHPT1Q9NRX4 125 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 VAX2Q9UIW0 290 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPS18CQ9Y3D5 142 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 HEBP2Q9Y5Z4 205 aa7.06□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM210A6NLX4 147 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CEACAM5P06731 702 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 PGA3P0DJD8 388 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 HSF1Q00613 529 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM160A2Q8N612 972 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 NOXO1Q8NFA2 376 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OR10A7Q8NGE5 316 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 STT3BQ8TCJ2 826 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 SPACA5Q96QH8 159 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OR8D2Q9GZM6 311 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CRISPLD2Q9H0B8 497 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF700Q9H0M5 742 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 V9GYS6 101 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM230AA0A1W2PPH8 454 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 M0QZK8 103 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 ATXN7O15265 892 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CCL16O15467 120 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 GGCTO75223 188 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OPN1MWP04001 364 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 APODP05090 189 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OR4A8P0C604 315 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OPN1MW2P0DN77 364 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 OPN1MW3P0DN78 364 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 ATP6V0CP27449 155 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPS11P82912 194 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF266Q14584 549 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CHRFAM7AQ494W8 412 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CHRDL2Q6WN34 429 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CLDND2Q8NHS1 167 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 RBMXL1Q96E39 390 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 TXNIPQ9H3M7 391 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM206AQ9NX38 181 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 COA3Q9Y2R0 106 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 RFNGQ9Y644 331 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 A0A1W2PP11 408 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 H0YGG7 62 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 NOVA1P51513 510 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 ARF3P61204 181 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 TAF9Q16594 264 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 IQCJQ1A5X6 159 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 TEX38Q6PEX7 206 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC26A10Q8NG04 563 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 CABLES2Q9BTV7 478 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 SRD5A3Q9H8P0 318 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 DECR2Q9NUI1 292 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 HCFC2Q9Y5Z7 792 aa7.05□□□□□ -1.28
HMGXB4-202ENST00000418170 PHF3Q92576 2039 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 LINC01553A4QN01 128 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 LILRB3O75022 631 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 RPLP1P05386 114 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 EDN3P14138 238 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 MSX1P28360 303 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 OR3A4PP47883 348 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 PDLIM4P50479 330 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 EWSR1Q01844 656 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 COL10A1Q03692 680 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 HERPUD1Q15011 391 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 SGCBQ16585 318 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 TCEAL5Q5H9L2 206 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 FBXL14Q8N1E6 418 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 DTD1Q8TEA8 209 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 RERGQ96A58 199 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 DNAJA3Q96EY1 480 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 BOD1Q96IK1 185 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ZFYVE21Q9BQ24 234 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 URM1Q9BTM9 101 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 FOXQ1Q9C009 403 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 GPR84Q9NQS5 396 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 HSF4Q9ULV5 492 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 SLC17A4Q9Y2C5 497 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 WDFY4Q6ZS81 3184 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 KIR2DL5BA0A0G2JN68 375 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 KIR2DL5BA0A0G2JPC4 375 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ST8SIA3O43173 380 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 H2BFMP0C1H6 154 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ADH5P11766 374 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF823P16415 610 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 KIR2DS3Q14952 304 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 PDGFRLQ15198 375 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms