RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RIDAP52758 137 aaKnown RBP11.74□□□□□ -0.53
PAF1-202ENST00000416728 EFNB2P52799 333 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 ROM1Q03395 351 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 ZNF679Q8IYX0 411 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 ASB17Q8WXJ9 295 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 AJUBAQ96IF1 538 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 ZNF488Q96MN9 340 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 OR8B4Q96RC9 309 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 THTPAQ9BU02 230 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 TTTY10Q9BZA0 68 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 RANBP3Q9H6Z4 567 aaPredicted RBP11.74□□□□□ -0.53
PAF1-202ENST00000416728 NUFIP1Q9UHK0 495 aaKnown RBP11.74□□□□□ -0.53
PAF1-202ENST00000416728 IKZF2Q9UKS7 526 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 POLDIP2Q9Y2S7 368 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 CMYA5Q8N3K9 4069 aa11.74□□□□□ -0.53
PAF1-202ENST00000416728 CCDC182A6NF36 153 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 J3QT63 122 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 NXPH2O95156 264 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 COX7A1P24310 79 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 PAX6P26367 422 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 PRDX2P32119 198 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 HAAOP46952 286 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 LGALS4P56470 323 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 ZNF573Q86YE8 665 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 KLHDC1Q8N7A1 406 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 C11orf44Q8N8P7 122 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 DTX3Q8N9I9 347 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 CCDC197Q8NCU1 140 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 OR4M1Q8NGD0 313 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 NPFFR1Q9GZQ6 430 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 C1orf21Q9H246 121 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 USE1Q9NZ43 259 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 GTF2A1LQ9UNN4 478 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 FOXJ3Q9UPW0 622 aa11.73□□□□□ -0.53
PAF1-202ENST00000416728 PRKDCP78527 4128 aaKnown RBP11.72□□□□□ -0.53
PAF1-202ENST00000416728 PRR32B1ATL7 298 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 LOC110117498-PIK3R3F6TDL0 507 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 SYNGR1O43759 233 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 TTRP02766 147 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 OPN1MWP04001 364 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 PGA5P0DJD9 388 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 OPN1MW2P0DN77 364 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 OPN1MW3P0DN78 364 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 CCL3L1P16619 93 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
PAF1-202ENST00000416728 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 MFGE8Q08431 387 aaPredicted RBP11.72□□□□□ -0.53
PAF1-202ENST00000416728 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 CRIP3Q6Q6R5 217 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 SPATA24Q86W54 205 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 OR2T27Q8NH04 317 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 PPP1R14AQ96A00 147 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 CNN2Q99439 309 aaKnown RBP11.72□□□□□ -0.53
PAF1-202ENST00000416728 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 PAPOLBQ9NRJ5 636 aaKnown RBP11.72□□□□□ -0.53
PAF1-202ENST00000416728 DNAJB9Q9UBS3 223 aa11.72□□□□□ -0.53
PAF1-202ENST00000416728 NOS1APO75052 506 aaPredicted RBP11.71□□□□□ -0.53
PAF1-202ENST00000416728 FAM107AO95990 144 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 BMXP51813 675 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 CRISP1P54107 249 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 ESRRGP62508 458 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 CBX1P83916 185 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 CFHR4Q92496 578 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
PAF1-202ENST00000416728 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 OR14J1Q9UGF5 321 aa11.71□□□□□ -0.53
PAF1-202ENST00000416728 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 G3V4G9 280 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 DLGAP1O14490 977 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 CHST1O43916 411 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 FKBP6O75344 327 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 TK1P04183 234 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 PIPP12273 146 aaPredicted RBP11.7□□□□□ -0.54
PAF1-202ENST00000416728 CXCR4P61073 352 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 ACTR3P61158 418 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 FLOT2Q14254 428 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 ZNF273Q14593 569 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 BEAN1Q3B7T3 259 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 BCL2L15Q5TBC7 163 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 TMEM42Q69YG0 159 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 ZNF322Q6U7Q0 402 aaPredicted RBP11.7□□□□□ -0.54
PAF1-202ENST00000416728 ZNF782Q6ZMW2 699 aaPredicted RBP11.7□□□□□ -0.54
PAF1-202ENST00000416728 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
PAF1-202ENST00000416728 R4GMQ9 66 aa11.7□□□□□ -0.54
PAF1-202ENST00000416728 TET2Q6N021 2002 aaPredicted RBP11.69□□□□□ -0.54
PAF1-202ENST00000416728 PRKYO43930 277 aa11.69□□□□□ -0.54
PAF1-202ENST00000416728 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms