RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TAS2R16Q9NYV7 291 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 IDI2-AS1Q9NZ38 188 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DOK5Q9P104 306 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4Q9UBX2 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 NAT8BQ9UHF3 227 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 MCTS1Q9ULC4 181 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 FZR1Q9UM11 496 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CARHSP1Q9Y2V2 147 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 EXOSC1Q9Y3B2 195 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RFNGQ9Y644 331 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 NFASCO94856 1347 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 KDM5AP29375 1690 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CTTNBP2Q8WZ74 1663 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ADGRL2O95490 1459 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ADAMTS12P58397 1594 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR5H15A6NDH6 313 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 LILRA5A6NI73 299 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ZAR1LA6NP61 321 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 YJEFN3A6XGL0 299 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TNFRSF11BO00300 401 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MFNGO00587 321 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MLNRO43193 412 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CRLF1O75462 422 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 KCNK2O95069 426 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CA1P00915 261 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 HLA-DQA2P01906 255 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MBPP02686 304 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SEMG1P04279 462 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ADORA3P0DMS8 318 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SRD5A1P18405 259 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 RCC1P18754 421 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SDC1P18827 310 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MYL12AP19105 171 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TNFRSF1BP20333 461 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 NPY1RP25929 384 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CHATP28329 748 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR3A2P47893 321 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 RFX2P48378 723 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 EMDP50402 254 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GZMMP51124 257 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TMBIM6P55061 237 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 RPL27P61353 136 aaKnown RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 HSPE1P61604 102 aaKnown RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ARG2P78540 354 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CAV1Q03135 178 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TGFBR3Q03167 851 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF763Q0D2J5 394 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GAGE2BQ13066 116 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GPR18Q14330 331 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MEF2DQ14814 521 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 RAB35Q15286 201 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR1C1Q15619 314 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 IZUMO4Q1ZYL8 232 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 C2orf68Q2NKX9 166 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SLC25A35Q3KQZ1 300 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CCSMST1Q4G0I0 132 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GAGE2EQ4V326 116 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 UNC50Q53HI1 259 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 DMRTC1Q5HYR2 192 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 FAM74A1Q5RGS3 127 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TPTE2P1Q5T6R2 138 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GAGE2AQ6NT46 116 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SFXN4Q6P4A7 337 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 LEG1Q6P5S2 330 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TRIM40Q6P9F5 258 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 DHRS11Q6UWP2 260 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ADAMTSL5Q6ZMM2 481 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OAFQ86UD1 273 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF567Q8N184 647 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR2L13Q8N349 312 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TCTEX1D1Q8N7M0 179 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TSTD1Q8NFU3 115 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR5A2Q8NGI9 324 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR4F5Q8NH21 305 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 PIFOQ8TCI5 191 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 DOK4Q8TEW6 326 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF418Q8TF45 676 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 NTN5Q8WTR8 489 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 RDH5Q92781 318 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 LRRC58Q96CX6 371 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 HYLS1Q96M11 299 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CCDC115Q96NT0 180 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 F2RL3Q96RI0 385 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GPER1Q99527 375 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 NKX3-1Q99801 234 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 NIPSNAP3BQ9BS92 247 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 NDFIP1Q9BT67 221 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 SLC17A9Q9BYT1 436 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF436Q9C0F3 470 aaPredicted RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 CDC42EP4Q9H3Q1 356 aaKnown RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 IKZF5Q9H5V7 419 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TAF9BQ9HBM6 251 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 ACOT13Q9NPJ3 140 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 DMAC2Q9NW81 257 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 MRPL27Q9P0M9 148 aaKnown RBP3.09□□□□□ -1.91
SF3B1-203ENST00000414174 GAGE2DQ9UEU5 116 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 TNFSF18Q9UNG2 199 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 HS3ST2Q9Y278 367 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms