RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ZBTB25P24278 435 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 INHBCP55103 352 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SOX8P57073 446 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NUTF2P61970 127 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NFATC3Q12968 1075 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NANOGP1Q8N7R0 232 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 DUSP18Q8NEJ0 188 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 C10orf82Q8WW14 230 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 APIPQ96GX9 242 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 METTL26Q96S19 204 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NMNAT3Q96T66 252 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NEU1Q99519 415 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SOSTQ9BQB4 213 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 RSRP1Q9BUV0 290 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PRDM14Q9GZV8 571 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MSL2Q9HCI7 577 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MBD5Q9P267 1494 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 EREGO14944 169 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TNFRSF1AP19438 455 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 LEPP41159 167 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ARSIQ5FYB1 569 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SLC25A30Q5SVS4 291 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PTOV1Q86YD1 416 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 IRF2BP1Q8IU81 584 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 BAP18Q8IXM2 172 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 LRRN4CLQ8ND94 238 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR5AN1Q8NGI8 311 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 LHFPL5Q8TAF8 219 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM74BQ9NUR3 256 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ZMIZ1Q9ULJ6 1067 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PRDX5P30044 214 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MAGEA5P43359 124 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 RELAQ04206 551 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TBR1Q16650 682 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF793Q6ZN11 406 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 LRP10Q7Z4F1 713 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PQLC3Q8N755 202 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR10G7Q8NGN6 311 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR52E5Q8NH55 327 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 DIRC2Q96SL1 478 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 JPT2Q9H910 190 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MED29Q9NX70 200 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ONECUT1Q9UBC0 465 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CCL27Q9Y4X3 112 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 A0A1B0GV90 55 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 C7orf66A4D0T2 115 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 KRBA1A5PL33 1030 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 FURINP09958 794 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 IL1R2P27930 398 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 EMX1Q04741 257 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CDC20Q12834 499 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TARBP2Q15633 366 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 RIPPLY2Q5TAB7 128 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 FBXL14Q8N1E6 418 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SPICQ8N5J4 248 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ZNF707Q96C28 371 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PCGF1Q9BSM1 259 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CISD1Q9NZ45 108 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NXT1Q9UKK6 140 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PTGDR2Q9Y5Y4 395 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SAMD9LQ8IVG5 1584 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 MYBPHLA2RUH7 354 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PRR32B1ATL7 298 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NXPH3O95157 252 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SCG5P05408 212 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ARSAP15289 507 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 GDF5P43026 501 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CRYBB1P53674 252 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM78Q5T7P6 136 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SLC23A3Q6PIS1 610 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 USP50Q70EL3 339 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CBARPQ8N350 705 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 CLDN22Q8N7P3 220 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR10S1Q8NGN2 331 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 RHBDD1Q8TEB9 315 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ZBTB45Q96K62 511 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OPALINQ96PE5 141 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 C1QTNF2Q9BXJ5 285 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 IFI27L2Q9H2X8 130 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PDZD7Q9H5P4 517 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 LYRM4Q9HD34 91 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PARP11Q9NR21 331 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 ELOVL5Q9NYP7 299 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 IL37Q9NZH6 218 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 BOLA1Q9Y3E2 137 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 UNC13BO14795 1591 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM189A5PLL7 270 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 TMEM189-UBE2V1I3L0A0 370 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 HCRTR1O43613 425 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 KLRC4O43908 158 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 HLA-GP17693 338 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 PLNP26678 52 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 GPR6P46095 362 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-202ENST00000411767 SUOXP51687 545 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 GSG1Q2KHT4 349 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 NHLRC3Q5JS37 347 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 Q8IYB0 196 aa4.13□□□□□ -1.75
PTPN13-202ENST00000411767 OR52M1Q8NGK5 317 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms