RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 NPRL2Q8WTW4 380 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 APH1BQ8WW43 257 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 TMIGD2Q96BF3 282 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 ZNF649Q9BS31 505 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 FRRS1LQ9P0K9 344 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-202ENST00000411423 ONECUT1Q9UBC0 465 aa15.68■□□□□ 0.1
SF3A1-202ENST00000411423 SLC25A10Q9UBX3 287 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-202ENST00000411423 IGHV1-69DA0A0B4J2H0 117 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 A0A1B0GVI7 797 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 LOC107986453A0A1B0GWG9 222 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 NKX6-3A6NJ46 265 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 HOXA3O43365 443 aaPredicted RBP15.67■□□□□ 0.1
SF3A1-202ENST00000411423 SYT7O43581 403 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 IGHV1-69P01742 117 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 RNASE1P07998 156 aaKnown RBP15.67■□□□□ 0.1
SF3A1-202ENST00000411423 DBTP11182 482 aaKnown RBP15.67■□□□□ 0.1
SF3A1-202ENST00000411423 MPZP25189 248 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 IL13RA1P78552 427 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 LRRC10Q5BKY1 277 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 MEDAGQ5VYS4 303 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 ZBTB49Q6ZSB9 765 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 OR2G2Q8NGZ5 317 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 OR10AC1Q8NH08 325 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 RHOXF1Q8NHV9 184 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 ZNF671Q8TAW3 534 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 H1FXQ92522 213 aaKnown RBP15.67■□□□□ 0.1
SF3A1-202ENST00000411423 AMBNQ9NP70 447 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 SIRT7Q9NRC8 400 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 FAM118AQ9NWS6 357 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 MYRFQ9Y2G1 1151 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 KPTNQ9Y664 436 aa15.67■□□□□ 0.1
SF3A1-202ENST00000411423 DAPL1A0PJW8 107 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 ANKRD61A6NGH8 418 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 RFPL4AA6NLU0 287 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 RFPL4AL1F8VTS6 287 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 F8VVB4 439 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 F8VWA3 439 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 NOS1APO75052 506 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-202ENST00000411423 HKR1P10072 659 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 KLRD1Q13241 179 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 AWAT1Q58HT5 328 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 TNFRSF14Q92956 283 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 ADAT3Q96EY9 351 aaPredicted RBP15.66■□□□□ 0.1
SF3A1-202ENST00000411423 SDSLQ96GA7 329 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 MED30Q96HR3 178 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 NRIP2Q9BQI9 281 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 HES4Q9HCC6 221 aa15.66■□□□□ 0.1
SF3A1-202ENST00000411423 IGKV1-9A0A0C4DH69 117 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 A0A0U1RQK1 487 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 LOC100130705A0A1B0GUX0 176 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 FAM230AA0A1W2PPH8 454 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 RNASEK-C17orf49H0YIS7 233 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 CLDN34H7C241 214 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 SLC16A6O15403 523 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 BAG2O95816 211 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 NDUFB7P17568 137 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 CAV3P56539 151 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 ERVK11-1P61568 191 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 PDCD1Q15116 288 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 Q6YL49 198 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 RNF144BQ7Z419 303 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 ZNF573Q86YE8 665 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 PNKDQ8N490 385 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 PELI1Q96FA3 418 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 ISG20L2Q9H9L3 353 aaKnown RBP15.65■□□□□ 0.1
SF3A1-202ENST00000411423 TNFRSF19Q9NS68 423 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 RASL12Q9NYN1 266 aa15.65■□□□□ 0.1
SF3A1-202ENST00000411423 J3QLW9 94 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 HAX1O00165 279 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 GPR37O15354 613 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 MELTFP08582 738 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 ZNF19P17023 458 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 ACTC1P68032 377 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 ACTA1P68133 377 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 FDX2Q6P4F2 183 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 FAM220AQ7Z4H9 259 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 LHFPL3Q86UP9 236 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 ACBD7Q8N6N7 88 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 KIR3DL3Q8N743 410 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 TMEM185AQ8NFB2 350 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 OR51A4Q8NGJ6 313 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 GATAD2BQ8WXI9 593 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 C4orf36Q96KX1 117 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 CHST5Q9GZS9 411 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 C19orf12Q9NSK7 152 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 MTCH1Q9NZJ7 389 aa15.64■□□□□ 0.09
SF3A1-202ENST00000411423 A0A1W2PRD5 423 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 A0A1W2PRF3 423 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 A0A1W2PRM7 423 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 E9PI62 339 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 IGHA1P01876 353 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 UBCP0CG48 685 aaKnown RBP15.63■□□□□ 0.09
SF3A1-202ENST00000411423 PRDX2P32119 198 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 BPIFB3P59826 476 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 IL24Q13007 206 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 SMN1Q16637 294 aaKnown RBP15.63■□□□□ 0.09
SF3A1-202ENST00000411423 HCP5Q6MZN7 132 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 C10orf67Q8IYJ2 551 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms