RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SGK3Q96BR1 496 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 ADAT1Q9BUB4 502 aaKnown RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 SAV1Q9H4B6 383 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 PADI1Q9ULC6 663 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 DNPH1O43598 174 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 MED6O75586 246 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 CRYGSP22914 178 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 DVL1P1P54792 670 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 PRAMEF20Q5VT98 475 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 C20orf196Q8IYI0 205 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 MAML2Q8IZL2 1156 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 SF3B5Q9BWJ5 86 aaKnown RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 RYDENQ9NUL5 291 aaKnown RBP14.57□□□□□ -0.08
LIMS2-208ENST00000410011 KCNIP3Q9Y2W7 256 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 AMDHD2Q9Y303 409 aa14.57□□□□□ -0.08
LIMS2-208ENST00000410011 CABIN1Q9Y6J0 2220 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 PQLC2LA1A4F0 135 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 ZIC3O60481 467 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 OR5H8P0DN80 308 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 FGF5P12034 268 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 LIFP15018 202 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 EPHA8P29322 1005 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-208ENST00000410011 GGNBP1Q5YKI7 109 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 COMMD1Q8N668 190 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 ZIC4Q8N9L1 334 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 KDF1Q8NAX2 398 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-208ENST00000410011 GLYATL2Q8WU03 294 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 WNT2BQ93097 391 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 CCDC74BQ96LY2 380 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 SH2D2AQ9NP31 389 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 PLEK2Q9NYT0 353 aa14.56□□□□□ -0.08
LIMS2-208ENST00000410011 FAM157AC9JC47 383 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 FCGR2CP31995 323 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 MTCP1P56278 107 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 HMGN3Q15651 99 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 EXT1Q16394 746 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 OR2A2Q6IF42 318 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 PIGTQ969N2 578 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 IMMP1LQ96LU5 166 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 RBM24Q9BX46 236 aaKnown RBP14.55□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM231Q9H6L2 316 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 ELL3Q9HB65 397 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-208ENST00000410011 BIN3Q9NQY0 253 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 NECAP2Q9NVZ3 263 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 ASCC3Q8N3C0 2202 aaKnown RBP14.55□□□□□ -0.08
LIMS2-208ENST00000410011 E5RGE8 158 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 TERTO14746 1132 aaKnown RBP14.55□□□□□ -0.08
LIMS2-208ENST00000410011 UCP2P55851 309 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM33P57088 247 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 RAC1P63000 192 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 RAB35Q15286 201 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 DMRTC1Q5HYR2 192 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 SHEQ5VZ18 495 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 LRRC18Q8N456 261 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 FBXO17Q96EF6 278 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 PROK2Q9HC23 129 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 WNT16Q9UBV4 365 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 FBXL17Q9UF56 701 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 ZNF391Q9UJN7 358 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 NSG2Q9Y328 171 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 FAM96BQ9Y3D0 163 aa14.55□□□□□ -0.08
LIMS2-208ENST00000410011 IGHV1-45A0A0A0MS14 117 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 MSTNO14793 375 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 SFTA3P0C7M3 94 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM225BP0DP42 221 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 FOLR2P14207 255 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 GABRR1P24046 479 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 IL11RAQ14626 422 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 CNN3Q15417 329 aaKnown RBP14.54□□□□□ -0.08
LIMS2-208ENST00000410011 M1APQ8TC57 530 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 POM121Q96HA1 1249 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 SUCNR1Q9BXA5 334 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 ULBP2Q9BZM5 246 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 ZNF700Q9H0M5 742 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 RNF122Q9H9V4 155 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 PLA2G2EQ9NZK7 142 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 STARD10Q9Y365 291 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 SEC11BP0C7V7 166 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 RCC1P18754 421 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-208ENST00000410011 PDZK1IP1Q13113 114 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 SNAI3Q3KNW1 292 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 KRTAP27-1Q3LI81 207 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 AVPI1Q5T686 147 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 GPR157Q5UAW9 335 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM42Q69YG0 159 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 GPR137CQ8N3F9 429 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 EGLN1Q9GZT9 426 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 FAM212BQ9NTI7 297 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-208ENST00000410011 TIMM10BQ9Y5J6 103 aa14.54□□□□□ -0.08
LIMS2-208ENST00000410011 MEX3AA1L020 520 aaKnown RBP14.53□□□□□ -0.08
LIMS2-208ENST00000410011 GJE1A6NN92 205 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 SYNGR3O43761 229 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 F12P00748 615 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-208ENST00000410011 DBHP09172 617 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 CST2P09228 141 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 NME2P22392 152 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 CHATP28329 748 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 UCP3P55916 312 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 TMEM187Q14656 261 aa14.53□□□□□ -0.08
LIMS2-208ENST00000410011 RSU1Q15404 277 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms