RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
LIMS2-206ENST00000409754 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 MYO7BQ6PIF6 2116 aa12.12□□□□□ -0.47
LIMS2-206ENST00000409754 CD300LBA8K4G0 201 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF736B4DX44 427 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 PRAF2O60831 178 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 RAB3DO95716 219 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 CELA3BP08861 270 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 GNG2P59768 71 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 PDZK1IP1Q13113 114 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ATAD3CQ5T2N8 411 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 OR4D10Q8NGI6 311 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 OR8S1Q8NH09 359 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ARHGAP5-AS1Q96IT6 56 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 Q96M66 194 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 OPN3Q9H1Y3 402 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 PCDHB16Q9NRJ7 776 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ANAPC10Q9UM13 185 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 LRRK2Q5S007 2527 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 A0A1W2PR80 420 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 PQLC2LA1A4F0 135 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ANGPTL7O43827 346 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 SSX5O60225 188 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 HTR3BO95264 441 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 CSTBP04080 98 aaKnown RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 GNLYP22749 145 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 MEF2DQ14814 521 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 FBXW12Q6X9E4 464 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 MYPOPQ86VE0 399 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 GIMAP1Q8WWP7 306 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
LIMS2-206ENST00000409754 OR10A4Q9H209 315 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
LIMS2-206ENST00000409754 ANKRD30BLA7E2S9 258 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 ARPC1BO15143 372 aaKnown RBP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 SMPD2O60906 423 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 CA11O75493 328 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 FCER2P06734 321 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 BLVRBP30043 206 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 CEACAM8P31997 349 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 CBX5P45973 191 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 PPA1Q15181 289 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 RTN4RL2Q86UN3 420 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 NAXEQ8NCW5 288 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 OR51S1Q8NGJ8 323 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 ST8SIA4Q92187 359 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 OR51J1Q9H342 316 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 IFT46Q9NQC8 304 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 NPDC1Q9NQX5 325 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-206ENST00000409754 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 MPC1Q9Y5U8 109 aa12.1□□□□□ -0.47
LIMS2-206ENST00000409754 IGKV1-12A0A0C4DH73 117 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 A0A1B0GUH1 482 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 AKR7A2O43488 359 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 PLATP00750 562 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 IGKV1D-12P01611 117 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 NAT1P18440 290 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 TBPP20226 339 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 MPZP25189 248 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 RPRMLQ8N4K4 120 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 FAM169BQ8N8A8 192 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 GALNT11Q8NCW6 608 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 OR5A2Q8NGI9 324 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 POM121Q96HA1 1249 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 MED30Q96HR3 178 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 GINS4Q9BRT9 223 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 PECRQ9BY49 303 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 MED28Q9H204 178 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 TP63Q9H3D4 680 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-206ENST00000409754 ZNF835Q9Y2P0 537 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 AMDHD2Q9Y303 409 aa12.09□□□□□ -0.47
LIMS2-206ENST00000409754 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-206ENST00000409754 DISC1C4P0D8 188 aa12.08□□□□□ -0.48
LIMS2-206ENST00000409754 M0QYG6 137 aa12.08□□□□□ -0.48
LIMS2-206ENST00000409754 IL5P05113 134 aa12.08□□□□□ -0.48
LIMS2-206ENST00000409754 PPP1CBP62140 327 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms