RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RPS27AP62979 156 aaKnown RBP10.63□□□□□ -0.71
CHMP3-204ENST00000409727 GNG3P63215 75 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 NKX6-1P78426 367 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-204ENST00000409727 ESPL1Q14674 2120 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 ADAM5Q6NVV9 412 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 DCDC5Q6ZRR9 648 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 OR10R2Q8NGX6 335 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 CHPT1Q8WUD6 406 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
CHMP3-204ENST00000409727 BBC3Q96PG8 261 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-204ENST00000409727 MICU1Q9BPX6 476 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 RTL8AQ9BWD3 113 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 C11orf54Q9H0W9 315 aaPredicted RBP10.63□□□□□ -0.71
CHMP3-204ENST00000409727 OR10A4Q9H209 315 aa10.63□□□□□ -0.71
CHMP3-204ENST00000409727 KALRNO60229 2985 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 CADP27708 2225 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 OR5B21A6NL26 309 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GABARAPH6UMI1 98 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 CTDSPLO15194 276 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 PLA2G10O15496 165 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 MLNRO43193 412 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 SYNGR1O43759 233 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 ORC5O43913 435 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 ZG16O60844 167 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GRPP07492 148 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GTF2F2P13984 249 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 SPNP16150 400 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 BCL3P20749 454 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 KITLGP21583 273 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 TUBG1P23258 451 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GLRXP35754 106 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GDNFP39905 211 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 PIGYQ3MUY2 71 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 RAB12Q6IQ22 244 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 Q6ZR03 302 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 Q6ZTK2 550 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 TOMM5Q8N4H5 51 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 GALNT11Q8NCW6 608 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 TMEM171Q8WVE6 324 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF488Q96MN9 340 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 TUBG2Q9NRH3 451 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 RABL2AQ9UBK7 228 aaPredicted RBP10.62□□□□□ -0.71
CHMP3-204ENST00000409727 POU2F3Q9UKI9 436 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 RABL2BQ9UNT1 228 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
CHMP3-204ENST00000409727 F5H5P2 479 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 GSTZ1O43708 216 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 RHBDL1O75783 438 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 PRSS3P35030 304 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 GMFBP60983 142 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 GPR176Q14439 515 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OXA1LQ15070 435 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 PDCD1Q15116 288 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 TAF9Q16594 264 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 FBXL19-AS1Q494R0 122 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 CDNFQ49AH0 187 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 C1QTNF12Q5T7M4 302 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OLFML2AQ68BL7 652 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 GDPD3Q7L5L3 318 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 NRARPQ7Z6K4 114 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF573Q86YE8 665 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 C1orf174Q8IYL3 243 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 FBXL14Q8N1E6 418 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OR56B1Q8NGI3 324 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 C15orf40Q8WUR7 153 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 RAB3CQ96E17 227 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 RBFOX1Q9NWB1 397 aaKnown RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF581Q9P0T4 197 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 NDRG3Q9UGV2 375 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 DIDO1Q9BTC0 2240 aaKnown RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 A0A0A6YYH2 397 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 A6NJ64 397 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 F8VVB4 439 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 F8VWA3 439 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF780AO75290 641 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 CYB5AP00167 134 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 BLVRBP30043 206 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 RPS23P62266 143 aaKnown RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ASAH1Q13510 395 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 C4orf17Q53FE4 359 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 PLAC9Q5JTB6 97 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 NKAPLQ5M9Q1 402 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 CDH24Q86UP0 819 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OSR2Q8N2R0 312 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 PXT1Q8NFP0 134 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 SETD6Q8TBK2 473 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 PLPPR2Q96GM1 343 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 MRPL37Q9BZE1 423 aaKnown RBP10.61□□□□□ -0.71
CHMP3-204ENST00000409727 OR51I2Q9H344 312 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 NGBQ9NPG2 151 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 CA10Q9NS85 328 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 NKIRAS2Q9NYR9 191 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 MTCH1Q9NZJ7 389 aa10.61□□□□□ -0.71
CHMP3-204ENST00000409727 IGSF10Q6WRI0 2623 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms