RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PPP1R3CQ9UQK1 317 aa13.96□□□□□ -0.17
TSPAN4-208ENST00000409531 POLDIP2Q9Y2S7 368 aa13.96□□□□□ -0.17
TSPAN4-208ENST00000409531 V9GY05 133 aa13.96□□□□□ -0.17
TSPAN4-208ENST00000409531 VPS13CQ709C8 3753 aa13.96□□□□□ -0.18
TSPAN4-208ENST00000409531 IGKV1-27A0A075B6S5 117 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 DPPA5A6NC42 116 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 H7C1Q1 480 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 J3QT63 122 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 NCR1O76036 304 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 CDRT1O95170 752 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 F12P00748 615 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 MPZP25189 248 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 EFNA4P52798 201 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 MRPS11P82912 194 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 PRAMEF6Q5VXH4 476 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 HAGHLQ6PII5 290 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 DNM1P46Q6ZS02 220 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 WDR86Q86TI4 376 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 SCCPDHQ8NBX0 429 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 OR11L1Q8NGX0 322 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF671Q8TAW3 534 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 HPS1Q92902 700 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 RBM38Q9H0Z9 239 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 GCM1Q9NP62 436 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 UFSP2Q9NUQ7 469 aa13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 AK6Q9Y3D8 172 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF469Q96JG9 3925 aaPredicted RBP13.95□□□□□ -0.18
TSPAN4-208ENST00000409531 IGHV1-69-2A0A0G2JMI3 117 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 LRRC30A6NM36 301 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 HPXP02790 462 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 INHBBP09529 407 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 CD37P11049 281 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 IRF2P14316 349 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 SERPINB10P48595 397 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 POU3F4P49335 361 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 MXD1Q05195 221 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 IL24Q13007 206 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 RIN1Q13671 783 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 MPPED2Q15777 294 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 ZNF181Q2M3W8 571 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 MOGAT3Q86VF5 341 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 C1orf87Q8N0U7 546 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 ZSCAN4Q8NAM6 433 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 Q8TCH9 128 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 AQP3Q92482 292 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 RDH5Q92781 318 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 RFT1Q96AA3 541 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 S100A13Q99584 98 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 PLGRKTQ9HBL7 147 aa13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 MYOZ1Q9NP98 299 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-208ENST00000409531 IGHV3-64DA0A0J9YX35 117 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 hCG_1807616A0A1W2PRN6 198 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 NOTOA8MTQ0 251 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 H3BMQ9 156 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 CDIPTO14735 213 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 TMEM127O75204 238 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 TMEM225BP0DP42 221 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 TGFBR1P36897 503 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 CFHR2P36980 270 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 PTGFRP43088 359 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 CAPZA1P52907 286 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 DSCR9P59020 149 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 PDZK1IP1Q13113 114 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 HFEQ30201 348 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 C1orf100Q5SVJ3 147 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 BIVMQ86UB2 503 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 ANGPTL5Q86XS5 388 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 CALHM1Q8IU99 346 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 SAXO1Q8IYX7 474 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 OR6M1Q8NGM8 313 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 OR10Z1Q8NGY1 313 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 TNFAIP8L1Q8WVP5 186 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 C12orf43Q96C57 262 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 DGCR14Q96DF8 476 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 COX4I2Q96KJ9 171 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 DCSTAMPQ9H295 470 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 C1orf123Q9NWV4 160 aa13.93□□□□□ -0.18
TSPAN4-208ENST00000409531 SLC17A2O00624 439 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 PLATP00750 562 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 ACAA1P09110 424 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 DAOP14920 347 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 CFPP27918 469 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 HTR2CP28335 458 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 ZP1P60852 638 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 SPRNQ5BIV9 151 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 WDR82Q6UXN9 313 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 SLC25A26Q70HW3 274 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 LYPD6Q86Y78 171 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 C11orf53Q8IXP5 236 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 Q8IYB0 196 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 PXT1Q8NFP0 134 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 OR5D18Q8NGL1 313 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 OR51F2Q8NH61 342 aa13.92□□□□□ -0.18
TSPAN4-208ENST00000409531 GFI1Q99684 422 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms