RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ZNF124Q15973 351 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 C3AR1Q16581 482 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 SULF2Q8IWU5 870 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 KCNG3Q8TAE7 436 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 FOXB1Q99853 325 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 PCDHGA1Q9Y5H4 931 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 FXYD6-FXYD2A0A087WZ82 144 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 MFNGO00587 321 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 HLA-AP01891 365 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 KCNJ3P48549 501 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 PPP1R1AQ13522 171 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 SNTB1Q13884 538 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 SKA3Q8IX90 412 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 NAXEQ8NCW5 288 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 SPTSSAQ969W0 71 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 CMSS1Q9BQ75 279 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 FXYD6Q9H0Q3 95 aa13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 ALX4Q9H161 411 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-202ENST00000409472 IGKV1-27A0A075B6S5 117 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 CYTIPO60759 359 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 TNFSF15O95150 251 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 SLC34A2O95436 690 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 MGMTP16455 207 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 HTR5AP47898 357 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 LHX2P50458 406 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 RPS27AP62979 156 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 SORDQ00796 357 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 TSPO2Q5TGU0 170 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ABHD17BQ5VST6 288 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ELP2Q6IA86 826 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 DHRS7BQ6IAN0 325 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 STEAP2Q8NFT2 490 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 OR1F12Q8NHA8 337 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 DOCK7Q96N67 2140 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 WNT5BQ9H1J7 359 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 GPR35Q9HC97 309 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 SLC2A8Q9NY64 477 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ZNF107Q9UII5 783 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 BOKQ9UMX3 212 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 OR6C6A6NF89 314 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ANGPTL7O43827 346 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 CST2P09228 141 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 CLDN18P56856 261 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 MEF2DQ14814 521 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ZNF660Q6AZW8 331 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 OR51T1Q8NGJ9 327 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 CPT1CQ8TCG5 803 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 TTTY12Q9BZ98 90 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 ELL3Q9HB65 397 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 UPB1Q9UBR1 384 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 LAMA5O15230 3695 aa13.22□□□□□ -0.29
SCAMP4-202ENST00000409472 BOD1L1Q8NFC6 3051 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 IGHV2-70P01814 119 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 LCATP04180 440 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 HPNP05981 417 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 GMFBP60983 142 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 TGIF1Q15583 401 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 TMEM164Q5U3C3 297 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 Q6ZSR3 168 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 OR4K15Q8NH41 348 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 LOXL4Q96JB6 756 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 RBM14Q96PK6 669 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 DMRTA2Q96SC8 542 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 PRRT1Q99946 306 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 FAM173AQ9BQD7 235 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 OR10A2Q9H208 303 aa13.21□□□□□ -0.29
SCAMP4-202ENST00000409472 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 MSTNO14793 375 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 SIGLEC5O15389 551 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 SPRY1O43609 319 aaPredicted RBP13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 CHRM2P08172 466 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 SELLP14151 372 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 RAB5BP61020 215 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 CCDC107Q8WV48 283 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 HAS2Q92819 552 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 NUDT16L1Q9BRJ7 211 aaKnown RBP13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 OR2H1Q9GZK4 316 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 PIGMQ9H3S5 423 aa13.21□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF503-AS2A6NEH8 195 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 C21orf140B9A014 251 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF587BE7ETH6 402 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 FBP1P09467 338 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 UBBP0CG47 229 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PI3P19957 117 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 ZBTB25P24278 435 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PTAFRP25105 342 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms