RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 GINS3Q9BRX5 216 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 NSG2Q9Y328 171 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 A0A1B0GV90 55 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 C17orf51A8MQB3 221 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 SEC14L6B5MCN3 397 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 H7C1Q1 480 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 AHSA1O95433 338 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 CFIP05156 583 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 RNF224P0DH78 156 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 HLA-DOBP13765 273 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 SELLP14151 372 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 IL12BP29460 328 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 ARL4DP49703 201 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 SLC37A1P57057 533 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 ZNF674Q2M3X9 581 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 CLEC9AQ6UXN8 241 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 OR10D4PQ8NGN7 298 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 SAP25Q8TEE9 199 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 SLAMF6Q96DU3 332 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 PIGQQ9BRB3 760 aa13.58□□□□□ -0.23
LIMS2-205ENST00000409455 NPIPA5E9PKD4 350 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 NPIPB7O75200 414 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 C1QL1O75973 258 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 WISP1O95388 367 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 HCKP08631 526 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 ECI1P42126 302 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 GGNBP1Q5YKI7 109 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 RNF144BQ7Z419 303 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 ZNF321PQ8N8H1 164 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 TMEM105Q8N8V8 129 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 OR51E1Q8TCB6 317 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-205ENST00000409455 GAL3ST4Q96RP7 486 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 GPER1Q99527 375 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 NUDT22Q9BRQ3 303 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 OR10A2Q9H208 303 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 SMDT1Q9H4I9 107 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 UNKLQ9H9P5 680 aaKnown RBP13.58□□□□□ -0.24
LIMS2-205ENST00000409455 BCO1Q9HAY6 547 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 NPIPA1Q9UND3 350 aa13.58□□□□□ -0.24
LIMS2-205ENST00000409455 CPAMD8Q8IZJ3 1885 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 A0A1B0GV50 99 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 A0A1W2PP11 408 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 FRG2CA6NGY1 282 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 TMEM150CB9EJG8 249 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 H3BMH7 237 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 FOLR1P15328 257 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 TMEM156Q8N614 296 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 CPNE4Q96A23 557 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-205ENST00000409455 GALNT14Q96FL9 552 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 TBL1XR1Q9BZK7 514 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 WDR87Q6ZQQ6 2873 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 SEC16AO15027 2179 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 MASP2O00187 686 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 PPP1R2P9O14990 202 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 SLC2A1P11166 492 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 SERPINA2P20848 420 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 GALNSP34059 522 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 DAP3P51398 398 aaKnown RBP13.57□□□□□ -0.24
LIMS2-205ENST00000409455 ZNF84P51523 738 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
LIMS2-205ENST00000409455 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 OR8D2Q9GZM6 311 aa13.57□□□□□ -0.24
LIMS2-205ENST00000409455 PNO1Q9NRX1 252 aaKnown RBP13.57□□□□□ -0.24
LIMS2-205ENST00000409455 A0A1B0GW64 132 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 ZNF878C9JN71 531 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 F10P00742 488 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 LRRC18Q8N456 261 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 OR51T1Q8NGJ9 327 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 ASB10Q8WXI3 467 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 MRPL24Q96A35 216 aaKnown RBP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 CYYR1Q96J86 154 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 TSTD3H0UI37 97 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 GPR137BO60478 399 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 CD63P08962 238 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 NKX6-1P78426 367 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 RSU1Q15404 277 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 ABHD12BQ7Z5M8 362 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 D2HGDHQ8N465 521 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 HSD17B11Q8NBQ5 300 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 SEMA6DQ8NFY4 1073 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
LIMS2-205ENST00000409455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 ATXN7L1Q9ULK2 861 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-205ENST00000409455 LY6G6EA0A0G2JKS1 128 aa13.55□□□□□ -0.24
LIMS2-205ENST00000409455 RAMP1O60894 148 aa13.55□□□□□ -0.24
LIMS2-205ENST00000409455 MBPP02686 304 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-205ENST00000409455 LMO1P25800 156 aa13.55□□□□□ -0.24
LIMS2-205ENST00000409455 PPP1CCP36873 323 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms