RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 TPD52L2O43399 206 aaKnown RBP17.29■□□□□ 0.36
VSX1-203ENST00000409285 F12P00748 615 aaPredicted RBP17.29■□□□□ 0.36
VSX1-203ENST00000409285 GRPP07492 148 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 RPS19P39019 145 aaKnown RBP17.29■□□□□ 0.36
VSX1-203ENST00000409285 OR10A3P58181 314 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 WDR82Q6UXN9 313 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 ASCL4Q6XD76 172 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 OR10Z1Q8NGY1 313 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 SLC25A46Q96AG3 418 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 GPER1Q99527 375 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 CNTD2Q9H8S5 307 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 MAST4O15021 2626 aa17.29■□□□□ 0.36
VSX1-203ENST00000409285 IGHV1-69-2A0A0G2JMI3 117 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 AIPO00170 330 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 CDIPTO14735 213 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 NOS1APO75052 506 aaPredicted RBP17.28■□□□□ 0.36
VSX1-203ENST00000409285 PTGFRP43088 359 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 MXD1Q05195 221 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 SPCS2Q15005 226 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 SFXN4Q6P4A7 337 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 MOGAT3Q86VF5 341 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 ANGPTL5Q86XS5 388 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 HPS1Q92902 700 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 MBD6Q96DN6 1003 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 GSX2Q9BZM3 304 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 RHOFQ9HBH0 211 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 CSMD1Q96PZ7 3565 aa17.28■□□□□ 0.36
VSX1-203ENST00000409285 MAP1AP78559 2803 aaPredicted RBP17.28■□□□□ 0.36
VSX1-203ENST00000409285 A6NLC8 198 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 HTR2CP28335 458 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 OR3A4PP47883 348 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 MKXQ8IYA7 352 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 OR4D6Q8NGJ1 314 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 ZNF671Q8TAW3 534 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 TNFAIP8L1Q8WVP5 186 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 RFT1Q96AA3 541 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 LURAP1Q96LR2 239 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 MYOZ1Q9NP98 299 aaPredicted RBP17.27■□□□□ 0.36
VSX1-203ENST00000409285 DLL4Q9NR61 685 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 UFSP2Q9NUQ7 469 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 BEX4Q9NWD9 120 aaPredicted RBP17.27■□□□□ 0.36
VSX1-203ENST00000409285 IL36GQ9NZH8 169 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 GHRLQ9UBU3 117 aa17.27■□□□□ 0.36
VSX1-203ENST00000409285 CYB5AP00167 134 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 LHBP01229 141 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 CLEC2LP0C7M8 214 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 PGA5P0DJD9 388 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 PMELP40967 661 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 CAPZA1P52907 286 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 SLC25A26Q70HW3 274 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 Q8IYB0 196 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 OR5D18Q8NGL1 313 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 OR11L1Q8NGX0 322 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 TBC1D15Q8TC07 691 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 RDH5Q92781 318 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 SLC25A28Q96A46 364 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 PLGRKTQ9HBL7 147 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 BARX1Q9HBU1 254 aaPredicted RBP17.26■□□□□ 0.35
VSX1-203ENST00000409285 C1orf123Q9NWV4 160 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 PLEKHA6Q9Y2H5 1048 aa17.26■□□□□ 0.35
VSX1-203ENST00000409285 IGHV3-64DA0A0J9YX35 117 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 LRRC30A6NM36 301 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 SRRM5B3KS81 715 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 SYNGR1O43759 233 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 RP2O75695 350 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 RHBDL1O75783 438 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 IGHV4-39P01824 125 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 UBBP0CG47 229 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 DAOP14920 347 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 DNASE1P24855 282 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 POU3F4P49335 361 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 ERVK11-1P61568 191 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 POC1AQ8NBT0 407 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 Q8NFD4 153 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 OR51F2Q8NH61 342 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 DYNC2LI1Q8TCX1 351 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 C1orf147Q96MC9 270 aaPredicted RBP17.25■□□□□ 0.35
VSX1-203ENST00000409285 NRIP2Q9BQI9 281 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 SMURF1Q9HCE7 757 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 MTCH1Q9NZJ7 389 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 STEAP1Q9UHE8 339 aa17.25■□□□□ 0.35
VSX1-203ENST00000409285 MRPS28Q9Y2Q9 187 aaKnown RBP17.25■□□□□ 0.35
VSX1-203ENST00000409285 SPRY1O43609 319 aaPredicted RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 KDM4BO94953 1096 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 FSTL3O95633 263 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 TMEM225BP0DP42 221 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 PTH2RP49190 550 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 SCAND1P57086 179 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 RAB11BQ15907 218 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 HFEQ30201 348 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 AWAT2Q6E213 333 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 ZNF826PQ6ZT77 177 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 C1orf87Q8N0U7 546 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 LRRC75A-AS1Q8N1F1 130 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 MRI1Q9BV20 369 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 HES4Q9HCC6 221 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 TMEM106BQ9NUM4 274 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 RNF7Q9UBF6 113 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 NPTNQ9Y639 398 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 TEX15Q9BXT5 2789 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms