RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 VN1R2Q8NFZ6 395 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 NOTCH3Q9UM47 2321 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 IL24Q13007 206 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 FAM53BQ14153 422 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF547Q8IVP9 402 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SLC46A2Q9BY10 475 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-203ENST00000409161 GFYI3L273 518 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 MPC2O95563 127 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TGFBR1P36897 503 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 NHLRC1Q6VVB1 395 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 COL16A1Q07092 1604 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TCRBV5S2A0A599 114 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 PLPP2O43688 288 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ATF1P18846 271 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 MLF1P58340 268 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 NOXO1Q8NFA2 376 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 OR5M1Q8NGP8 315 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 MTFP1Q9UDX5 166 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF236Q9UL36 1845 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 HIST3H3Q16695 136 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SCN7AQ01118 1682 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM265A0A087WTH1 108 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TTRP02766 147 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 STAG3L3P0CL85 134 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ASCL1P50553 236 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF738Q8NE65 137 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 OIT3Q8WWZ8 545 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 NAA60Q9H7X0 242 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 ALS2Q96Q42 1657 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TBX19O60806 448 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 IL2RAP01589 272 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM116Q8NCL8 245 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 CORTO00230 105 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 FAM3BP58499 235 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 RPL30P62888 115 aaKnown RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF816Q0VGE8 651 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ALKAL1Q6UXT8 129 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 LILRB1Q8NHL6 650 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 PPT2Q9UMR5 302 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 LANCL1O43813 399 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 SARAFQ96BY9 339 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ADTRPQ96IZ2 230 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF865P0CJ78 1059 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 SLC19A1P41440 591 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 HLA-DRB3P79483 266 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 KHDC3LQ587J8 217 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 OTOSQ8NHW6 89 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 MLF2Q15773 248 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 C9orf170A2RU37 121 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 CST7O76096 145 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 IGHA1P01876 353 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 IGHA2P01877 340 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 B2MP61769 119 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 PMP22Q01453 160 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 GSG1Q2KHT4 349 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 KMT5CQ86Y97 462 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 LRRC3BQ96PB8 259 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 MRPL37Q9BZE1 423 aaKnown RBP10.92□□□□□ -0.66
SHANK2-203ENST00000409161 GNB2P62879 340 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 FAAP20Q6NZ36 180 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 OR52B4Q8NGK2 314 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 KLK11Q9UBX7 282 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 PARP14Q460N5 1801 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 MASP2O00187 686 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 GNG3P63215 75 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 IGSF11Q5DX21 431 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 MORN1Q5T089 497 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 TCTN3Q6NUS6 607 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 PIK3IP1Q96FE7 263 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 DOK1Q99704 481 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ZFP30Q9Y2G7 519 aa10.92□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF195O14628 629 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 PPP2CAP67775 309 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
SHANK2-203ENST00000409161 CD226Q15762 336 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 MFNGO00587 321 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 DHRS3O75911 302 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 ERVS71-1P61550 626 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 OR2B11Q5JQS5 317 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 PRSS54Q6PEW0 395 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 C6orf15Q6UXA7 325 aaPredicted RBP10.91□□□□□ -0.66
SHANK2-203ENST00000409161 OR5A2Q8NGI9 324 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 SLC7A10Q9NS82 523 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 CA10Q9NS85 328 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 ANXA10Q9UJ72 324 aa10.91□□□□□ -0.66
SHANK2-203ENST00000409161 ACVR1Q04771 509 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms