RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MRPS17Q9Y2R5 130 aaKnown RBP8.56□□□□□ -1.04
MSH2-202ENST00000406134 OR6C6A6NF89 314 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ZNF726A6NNF4 738 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 M0R135 149 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 DHHO43323 396 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 TPT1P13693 172 aaKnown RBP8.56□□□□□ -1.04
MSH2-202ENST00000406134 NPBWR1P48145 328 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 RRADP55042 308 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 DEFA5Q01523 94 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 FAM209BQ5JX69 171 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 RPL7L1Q6DKI1 246 aaKnown RBP8.56□□□□□ -1.04
MSH2-202ENST00000406134 SEMA6DQ8NFY4 1073 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 HPSE2Q8WWQ2 592 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 PP6455Q8WZ26 134 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 ZNF799Q96GE5 643 aa8.56□□□□□ -1.04
MSH2-202ENST00000406134 SMG1Q96Q15 3661 aaKnown RBP8.56□□□□□ -1.04
MSH2-202ENST00000406134 SERPINE3A8MV23 424 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 DSCR4P56555 118 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 CSNK2A1P68400 391 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 FAM27BQ5VT28 67 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 PMS2CLQ68D20 193 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 TMEM88Q6PEY1 159 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 CSNK2A3Q8NEV1 391 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 SULT4A1Q9BR01 284 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 DUSP23Q9BVJ7 150 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 FGF23Q9GZV9 251 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 MMP26Q9NRE1 261 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 GPR173Q9NS66 373 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 CRIM1Q9NZV1 1036 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 AK3Q9UIJ7 227 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 ESPL1Q14674 2120 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 SPRY1O43609 319 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 ANGPTL7O43827 346 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 CXCL12P48061 93 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 ZFP36L1Q07352 338 aaKnown RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 SURF2Q15527 256 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 DHRS7BQ6IAN0 325 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 BTNL8Q6UX41 500 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 IFI44Q8TCB0 444 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 GPER1Q99527 375 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 URM1Q9BTM9 101 aaKnown RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 SAV1Q9H4B6 383 aaPredicted RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 FAM96BQ9Y3D0 163 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 LAMA5O15230 3695 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 BSNQ9UPA5 3926 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 CCDC187A0A096LP49 1063 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 LRRC3CA6NJW4 275 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 ZNF587BE7ETH6 402 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 DEDDO75618 318 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 FCGR3AP08637 254 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 RFPL3SP0C7P2 107 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 MLF1P58340 268 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 TAS2R46P59540 309 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 MRPS34P82930 218 aaKnown RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 MRPL24Q96A35 216 aaKnown RBP8.55□□□□□ -1.04
MSH2-202ENST00000406134 CDC6Q99741 560 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
MSH2-202ENST00000406134 PATE4P0C8F1 98 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 FKBP2P26885 142 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 CHATP28329 748 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 ZNF774Q6NX45 483 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 DHRS11Q6UWP2 260 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 AGBL5Q8NDL9 886 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 DMBX1Q8NFW5 382 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 M1APQ8TC57 530 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 ERGIC1Q969X5 290 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 C10orf35Q96D05 121 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 ZNF2Q9BSG1 426 aaPredicted RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 ARV1Q9H2C2 271 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 C19orf25Q9UFG5 118 aaPredicted RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 ANXA10Q9UJ72 324 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 CD5P06127 495 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 HOXB5P09067 269 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 GABRR1P24046 479 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 CYCSP99999 105 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 PIGYQ3MUY2 71 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 LYSMD4Q5XG99 296 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 C5orf24Q7Z6I8 188 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 GPR137CQ8N3F9 429 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 WFDC1Q9HC57 220 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 RCC2Q9P258 522 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 DNAJB11Q9UBS4 358 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 PINLYPA6NC86 204 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 EDN3P14138 238 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 NOVA1P51513 510 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 IL11RAQ14626 422 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 ZNF528Q3MIS6 628 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 OR10AD1Q8NGE0 317 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 NRIP2Q9BQI9 281 aa8.54□□□□□ -1.04
MSH2-202ENST00000406134 RBM24Q9BX46 236 aaKnown RBP8.54□□□□□ -1.04
MSH2-202ENST00000406134 DEPPQ9NTK1 212 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms