RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 C8orf44Q96CB5 159 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 COX14Q96I36 57 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 H3BP45 60 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 RNF151Q2KHN1 245 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 OR11H7Q8NGC8 314 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 A0A096LPE4 126 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 A0A1W2PPZ6 126 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 GPM6AP51674 278 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 M1APQ8TC57 530 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 USB1Q9BQ65 265 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 CNTD2Q9H8S5 307 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 UQCC1Q9NVA1 299 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 INTS1Q8N201 2190 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 IGHV3-15A0A0B4J1V0 119 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 HNF1AP20823 631 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 SLC37A1P57057 533 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 RAB32Q13637 225 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 OR2B11Q5JQS5 317 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 OR10D4PQ8NGN7 298 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 OR5C1Q8NGR4 320 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 NAA60Q9H7X0 242 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 UBE2ZQ9H832 354 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 AP4M1O00189 453 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 CTSVO60911 334 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 SNRPEP62304 92 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 TP53I13Q8NBR0 393 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 ZBTB25P24278 435 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 TRIM61Q5EBN2 209 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 EXTL1Q92935 676 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 ZNF230Q9UIE0 474 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 PTPRDP23468 1912 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 J3QR89 54 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 ZNF79Q15937 498 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 TMEM196Q5HYL7 178 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 GGNBP1Q5YKI7 109 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 FBXL14Q8N1E6 418 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 MED12Q93074 2177 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 TMEM218A2RU14 115 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 FAM166BA8MTA8 275 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 CDC14BO60729 498 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 GALR1P47211 349 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 OR2A5Q96R48 311 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 LPAR3Q9UBY5 353 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 NYNRINQ9P2P1 1898 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 WISP3O95389 354 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 FABP4P15090 132 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 MOB1BQ7L9L4 216 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 CRLF2Q9HC73 371 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
SNED1-205ENST00000405547 FBXO34Q9NWN3 711 aa11.93□□□□□ -0.5
SNED1-205ENST00000405547 POLEQ07864 2286 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 GNG3P63215 75 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZNF117Q03924 483 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 TCTN1Q2MV58 587 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 DOCK8Q8NF50 2099 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 SPRY1O43609 319 aaPredicted RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 TMEM241Q24JQ0 296 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 OR2C3Q8N628 320 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 RPS4Y2Q8TD47 263 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 TRAF4Q9BUZ4 470 aaPredicted RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZNF17P17021 662 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ISXQ2M1V0 245 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 PIK3IP1Q96FE7 263 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 HIST1H3AP68431 136 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZNF718Q3SXZ3 478 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 NPEPL1Q8NDH3 523 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 TSPAN32Q96QS1 320 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZNF355PQ9NSJ1 428 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 PLPP3O14495 311 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 SMIM6P0DI80 62 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 CD200P41217 278 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 FXNQ16595 210 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 TSEN54Q7Z6J9 526 aaKnown RBP11.92□□□□□ -0.5
SNED1-205ENST00000405547 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
SNED1-205ENST00000405547 AQP7P3A6NL99 342 aa11.91□□□□□ -0.5
SNED1-205ENST00000405547 MASP2O00187 686 aa11.91□□□□□ -0.5
SNED1-205ENST00000405547 CXCL13O43927 109 aa11.91□□□□□ -0.5
SNED1-205ENST00000405547 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms