RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SSX6Q7RTT6 188 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CD302Q8IX05 232 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 SELENOHQ8IZQ5 122 aaKnown RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF561Q8N587 486 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 TMEM105Q8N8V8 129 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR4M2Q8NGB6 313 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 C17orf50Q8WW18 174 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 LINC00477Q96M19 166 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 GPR82Q96P67 336 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CYTH2Q99418 400 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 TSNAXQ99598 290 aaKnown RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 CIB1Q99828 191 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 SULT4A1Q9BR01 284 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 LLPHQ9BRT6 129 aaKnown RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF2Q9BSG1 426 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 EMC6Q9BV81 110 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 SFXN3Q9BWM7 321 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 ING2Q9H160 280 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 RMND1Q9NWS8 449 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 VAPAQ9P0L0 249 aa2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 NXT1Q9UKK6 140 aaKnown RBP2.2□□□□□ -2.06
HMGB1P17-201ENST00000403495 LOC102724200A0A096LPH7 203 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 TRAV8-4A0A0B4J246 113 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGHV2OR16-5A0A0B4J2B6 119 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 FAM240AA0A1B0GVK7 77 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 A8MUU9 505 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 hCG_2039718K7EN88 272 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 PSPHP1O15172 72 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 GATCO43716 136 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 ALOX12BO75342 701 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 UPK1BO75841 260 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 GATBO75879 557 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 CDRT1O95170 752 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 LDOC1O95751 146 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 FADS2O95864 444 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 P01737 135 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 SLC35G6P0C7Q6 338 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 UBE2KP61086 200 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 C2orf80Q0P641 193 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 DYNC1I2Q13409 638 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 KLHL12Q53G59 568 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 THOC7Q6I9Y2 204 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 SLC25A34Q6PIV7 304 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 HMGN2P46Q86SG4 172 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 SLC7A5P1Q8MH63 180 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 STK40Q8N2I9 435 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 RNF182Q8N6D2 247 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 CDRT4Q8N9R6 151 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR9A2Q8NGT5 310 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR10Z1Q8NGY1 313 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 ENKURQ8TC29 256 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 GTF2H4Q92759 462 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 RMI2Q96E14 147 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 WDR34Q96EX3 536 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 DHX35Q9H5Z1 703 aaKnown RBP2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 PLEKHF2Q9H8W4 249 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR2S2Q9NQN1 319 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 DDIT4Q9NX09 232 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 SDHAF2Q9NX18 166 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 MS4A12Q9NXJ0 267 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 ENPP4Q9Y6X5 453 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 TUBGCP6Q96RT7 1819 aa2.19□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGHV6-1A0A0B4J1U7 121 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGHV1-3A0A0C4DH29 117 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 A0A1W2PQ67 120 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 F8VP50 259 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 RNASEK-C17orf49H0YIS7 233 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CALUO43852 315 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 E2F6O75461 281 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CDK14O94921 469 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 RCBTB2O95199 551 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGKV1-39P01597 117 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 IGKV1D-39P04432 117 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZNF14P17017 642 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 IL3RAP26951 378 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CRATP43155 626 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR2B6P58173 313 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 TAS2R43P59537 309 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 GRB2P62993 217 aaKnown RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 IL5RAQ01344 420 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 C2orf54Q08AI8 447 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 MFSD14CQ5VZR4 134 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 UNQ9165/PRO28630Q6UXU0 137 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 SETD3Q86TU7 594 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CYP4Z1Q86W10 505 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CA13Q8N1Q1 262 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 ATPAF2Q8N5M1 289 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR2Z1Q8NG97 314 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 OR1S1Q8NH92 325 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 HGDQ93099 445 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 SERPINB11Q96P15 392 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CATSPER2Q96P56 530 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 RNF157Q96PX1 679 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 MED10Q9BTT4 135 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 CHCHD7Q9BUK0 85 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 ZSCAN16Q9H4T2 348 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 SND1-IT1Q9HBX3 110 aa2.18□□□□□ -2.06
HMGB1P17-201ENST00000403495 C6orf50Q9HD87 102 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms