RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PYCARD-AS1I3L0S3 204 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 GPR3P46089 330 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 CADM3Q8N126 398 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 FLYWCH2Q96CP2 140 aaKnown RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 K7ESF4 209 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 RNF2Q99496 336 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 NRXN3Q9Y4C0 1643 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 IGKV3D-15A0A087WSY6 115 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 ZNF716A6NP11 495 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 IGKV3-15P01624 115 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 CD1BP29016 333 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 CD276Q5ZPR3 534 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 TMEM215Q68D42 235 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 IL36GQ9NZH8 169 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 TMEM272A0A1B0GTI8 110 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 MGPP08493 103 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 FKBP2P26885 142 aaKnown RBP12.27□□□□□ -0.44
VAPA-202ENST00000400000 REG1BP48304 166 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.44
VAPA-202ENST00000400000 CDK5Q00535 292 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 PAX5Q02548 391 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 IL21Q9HBE4 155 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 JTBO76095 146 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 TRAPPC2P0DI81 140 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 TRAPPC2BP0DI82 140 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 PNLIPP16233 465 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 USF1P22415 310 aaPredicted RBP12.27□□□□□ -0.44
VAPA-202ENST00000400000 WDR88Q6ZMY6 472 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 TP53I13Q8NBR0 393 aaPredicted RBP12.27□□□□□ -0.44
VAPA-202ENST00000400000 TTC9Q92623 222 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 ZG16BQ96DA0 208 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 RAB18Q9NP72 206 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 TMEM140Q9NV12 185 aa12.27□□□□□ -0.44
VAPA-202ENST00000400000 CALCRP30988 508 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 LINC00303Q3SY05 128 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 CD200P41217 278 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 CAMPP49913 170 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 BAK1Q16611 211 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 BHLHA15Q7RTS1 189 aaPredicted RBP12.27□□□□□ -0.45
VAPA-202ENST00000400000 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 CCL21O00585 134 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 AQP6Q13520 282 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 TSPO2Q5TGU0 170 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 DGAT2L6Q6ZPD8 337 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 SLC16A12Q6ZSM3 486 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 FAM122BQ7Z309 247 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 LYG2Q86SG7 212 aa12.27□□□□□ -0.45
VAPA-202ENST00000400000 PTOV1Q86YD1 416 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ZBTB44Q8NCP5 570 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ZNF638Q14966 1978 aaKnown RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 TMEM129A0AVI4 362 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ECSCRQ19T08 205 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 TMEM108Q6UXF1 575 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 MYPOPQ86VE0 399 aaPredicted RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 OR3A1P47881 315 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 FAM53BQ14153 422 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 MRPL58Q14197 206 aaKnown RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 KISS1Q15726 138 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ZNF628Q5EBL2 1059 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 NSUN5P2Q63ZY6 315 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ZNF385DQ9H6B1 395 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 MS4A18H0YCH9 400 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 MASP2O00187 686 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 CT62P0C5K7 136 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 MS4A18Q3C1V0 323 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 WDR38Q5JTN6 314 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 OR2A2Q6IF42 318 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 VWA1Q6PCB0 445 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 ETV3LQ6ZN32 361 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 OR4F17Q8NGA8 305 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 DYRK2Q92630 601 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 TUBAL3A6NHL2 446 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 SMAD7O15105 426 aaKnown RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 IGLV3-27P01718 113 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 RAE1P78406 368 aaKnown RBP12.26□□□□□ -0.45
VAPA-202ENST00000400000 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 C4orf45Q96LM5 186 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
VAPA-202ENST00000400000 KIAA1324LA8MWY0 1029 aaPredicted RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 SMIM18P0DKX4 95 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 ARL6IP6Q8N6S5 226 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 ZNF629Q9UEG4 869 aaPredicted RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 GNG3P63215 75 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 FAM26EQ8N5C1 309 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 SNCGO76070 127 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 HIKESHIQ53FT3 197 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms