RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 C17orf51A8MQB3 221 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 ETFBKMTQ8IXQ9 262 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 LRRC15Q8TF66 581 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 IP6K3Q96PC2 410 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 PLSCR3Q9NRY6 295 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 BEX4Q9NWD9 120 aaPredicted RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 CXorf1O96002 111 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 HLA-DQA1P01909 254 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 NHSL2Q5HYW2 709 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 EBLN2Q6P2I7 272 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 ILDR1Q86SU0 546 aaPredicted RBP7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 WNT5BQ9H1J7 359 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 NCOR1P1Q9H4R4 102 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 GORASP2Q9H8Y8 452 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 PLAGL1Q9UM63 463 aa7.78□□□□□ -1.16
CACNA1C-220ENST00000399655 IAPPP10997 89 aa7.77□□□□□ -1.16
CACNA1C-220ENST00000399655 SPNS3Q6ZMD2 512 aa7.77□□□□□ -1.16
CACNA1C-220ENST00000399655 ZDHHC8Q9ULC8 765 aa7.77□□□□□ -1.16
CACNA1C-220ENST00000399655 NCOA3Q9Y6Q9 1424 aa7.77□□□□□ -1.16
CACNA1C-220ENST00000399655 CLDN7O95471 211 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 PLAUP00749 431 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 HOXA6P31267 233 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 IL36GQ9NZH8 169 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 LPAR3Q9UBY5 353 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 M0QYG6 137 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 SP9P0CG40 484 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 LPPQ93052 612 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 TOX2Q96NM4 488 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MADDQ8WXG6 1647 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 TRBV9A0A0B4J1U6 114 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 STATHP02808 62 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CKS2P33552 79 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 PIP5KL1Q5T9C9 394 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 SDHAF4Q5VUM1 108 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CYB5D2Q8WUJ1 264 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 FEZF1A0PJY2 475 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 ACVR1Q04771 509 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF480Q8WV37 535 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 RARRES2Q99969 163 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 C2CD4BA6NLJ0 364 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MEF2BQ02080 365 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 OR1Q1Q15612 314 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 KCNMB1Q16558 191 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 RNFT1Q5M7Z0 435 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 ANKRD37Q7Z713 158 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 OR9Q2Q8NGE9 314 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 RHBDD1Q8TEB9 315 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 TBX21Q9UL17 535 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 PHLDA3Q9Y5J5 127 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 TMEM30CPA0ZSE6 113 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CCL22O00626 93 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 FBXO46Q6PJ61 603 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 LYPD8Q6UX82 237 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MOB3BQ86TA1 216 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 OR6X1Q8NH79 312 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 SDR39U1Q9NRG7 319 aaPredicted RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CBLN4Q9NTU7 201 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MYLKQ15746 1914 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 TMEM233B4DJY2 109 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 GEMIN2O14893 280 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 LAMTOR5O43504 91 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 HRO43593 1189 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 PCMT1P22061 227 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 PRICKLE4Q2TBC4 344 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 FCRLBQ6BAA4 426 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 ZADH2Q8N4Q0 377 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 DTLQ9NZJ0 730 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CTDSPLO15194 276 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MDGA1Q8NFP4 955 aa7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 MRPL20Q9BYC9 149 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-220ENST00000399655 CD38P28907 300 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 RAC3P60763 192 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 LRRC26Q2I0M4 334 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TEX264Q9Y6I9 313 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CXCL17Q6UXB2 119 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 NPEPL1Q8NDH3 523 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 OR52N1Q8NH53 320 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SORL1Q92673 2214 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 AGRNO00468 2067 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 K7ESF4 209 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 CLDN20P56880 219 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 SLC38A11Q08AI6 406 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 COMMD6Q7Z4G1 85 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 C1QTNF6Q9BXI9 259 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 TMEM94Q12767 1356 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 ZNF296Q8WUU4 475 aaPredicted RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 STARD10Q9Y365 291 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 RBMY1FQ15415 496 aaKnown RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 A0A0J9YY10 115 aa7.76□□□□□ -1.17
CACNA1C-220ENST00000399655 A1L4Q6 167 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms